TCONS_00014033-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00014033-protein
Unique Name	TCONS_00014033-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	451

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00014033-protein ID=TCONS_00014033-protein|Name=TCONS_00014033-protein|organism=Clytia hemisphaerica|type=polypeptide|length=451bp
MTAGEGCLKLPFVDLVSLIPDTVKKMNALDKSLFDSSIDVPAIKCLPALC
GMVQKEFKYILFNRPHFRKIIPCEEKNSKDRLILLHTHIKTKDDLNKKQL
DFMEKNKCTFLIHHMTISYNDFTFDEIVKKIFPENTKDIVTSFETVGHIA
HLNLKPTMFDHKKLIGELLLDKNKNIKTVVNKTNSIEETFRFFKMELLAG
EDKMNATVHEHGCVFEFDYSKVYWNSRLQTEHQRIVKEISPEDVVYDVFA
GVGPFSIPVAKKVKEVYANDLNVESYKALKHNAELNKVQVKAYNLEGREF
LDQIVIEEGICKTETCESLSNRKKHIIMNLPAIAPEFLDVFADKYATFNL
PLKIHPNILIHCYCFCKTKTPEEEAILRVSEILQVDISPTSKVHFVRRVA
PNKVMMCVTFNLIWFEHKVEKCSCTNITSEFSRKRPAEGGDIPTEGKKTR
L

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_007850	XLOC_007850	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00014033	TCONS_00014033	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR030382	MeTrfase_TRM5/TYW2
IPR025792	tRNA_Gua_MeTrfase_euk
IPR029063	SAM-dependent_MTases

Vocabulary: **Molecular Function**
Term	Definition
GO:0009019	tRNA (guanine-N1-)-methyltransferase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0030488	tRNA methylation

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030488	tRNA methylation
molecular_function	GO:0009019	tRNA (guanine-N1-)-methyltransferase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.300.110		coord: 133..201 e-value: 3.0E-22 score: 78.2
None	No IPR available	GENE3D	3.40.50.150		coord: 203..414 e-value: 1.2E-34 score: 118.7
IPR030382	SAM-dependent methyltransferase TRM5/TYW2-type	PFAM	PF02475	Met_10	coord: 141..343 e-value: 1.9E-61 score: 207.2
IPR030382	SAM-dependent methyltransferase TRM5/TYW2-type	PROSITE	PS51684	SAM_MT_TRM5_TYW2	coord: 143..414 score: 95.77
IPR025792	tRNA (guanine(37)-N(1))-methyltransferase, eukaryotic	HAMAP	MF_03152	TRM5	coord: 26..444 score: 24.939
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 137..412

Blast

[Close]

BLAST of TCONS_00014033-protein vs. Swiss-Prot (Human)
Match: TRM5 (tRNA (guanine(37)-N1)-methyltransferase OS=Homo sapiens GN=TRMT5 PE=1 SV=2)

HSP 1 Score: 297.745 bits (761), Expect = 6.977e-96
Identity = 162/401 (40.40%), Postives = 239/401 (59.60%), Query Frame = 0

Query:   20 PDTVKKMNALDKSLFDSSIDVPAIKCLPALCGMVQKEFKYILFNRPHFRKIIPCEEKNSKDRLILLHTH-IKTKDDLNKKQLDFMEKNKCTFLI--HHMTISYNDFTFDEIVKKIFPENTKDIVTSFETVGHIAHLNLKPTMFDHKKLIGELLLDKNKNIKTVVNKTNSIEETFRFFKMELLAGEDKMNATVHEHGCVFEFDYSKVYWNSRLQTEHQRIVKEISPEDVVYDVFAGVGPFSIPVAKKVKEVYANDLNVESYKALKHNAELNKV--QVKAYNLEGREFLDQIVIEEGICKTETCESLSNRKK---HIIMNLPAIAPEFLDVFADKYATFNLPLKIHPNILIHCYCFCKTKTPEEEAILRVSEILQVDISPTSKVHFVRRVAPNKVMMCVTFNL 412
            P  V+ M  LD++ F  ++++P +K    +   + +  K     RP  R++I   E + + RLI+L  + I T D   K +L  +E+   +  I  +++ ++Y  F  +EI++ + PE  +D+ + F  +GHIAHLNL+      K LIG++++DKN  I + VNK N+I+  +R F+ME+L+GE  M   V E+   +EFD+SKVYWN RL TEH RI + + P DV++DVFAGVGPF+IPVAKK   V+ANDLN ES+K L +N +LNKV  +VK +NL+G++FL   V EE +        LS  +K   H++MNLPA A EFL  F  K+     P       ++HCY F K   P E+   R   +L + +   S VH VR VAPNK M+C+TF +
Sbjct:   76 PSDVRGMTKLDRTAFKKTVNIPVLKVRKEIVSKLMRSLKRAALQRPGIRRVIEDPE-DKESRLIMLDPYKIFTHDSFEKAELSVLEQLNVSPQISKYNLELTYEHFKSEEILRAVLPEG-QDVTSGFSRIGHIAHLNLRDHQLSFKHLIGQVMIDKNPGITSAVNKINNIDNMYRNFQMEVLSGEQNMMTKVRENNYTYEFDFSKVYWNPRLSTEHSRITELLKPGDVLFDVFAGVGPFAIPVAKKNCTVFANDLNPESHKWLLYNCKLNKVDQKVKVFNLDGKDFLQGPVKEELM----QLLGLSKERKPSVHVVMNLPAKAIEFLSAF--KWLLDGQPCSSEFLPIVHCYSFSKDANPAEDVRQRAGAVLGISLEACSSVHLVRNVAPNKEMLCITFQI 468

The following BLAST results are available for this feature:

BLAST of TCONS_00014033-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00014033-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
TRM5	6.977e-96	40.40	tRNA (guanine(37)-N1)-methyltransferase OS=Homo sa...	[more]

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TCONS_00014033-protein (polypeptide) - C. hemisphaerica