TCONS_00013909-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00013909-protein
Unique NameTCONS_00013909-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length115

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00013909-protein ID=TCONS_00013909-protein|Name=TCONS_00013909-protein|organism=Clytia hemisphaerica|type=polypeptide|length=115bp
MAALSMKGWQRPEMRFRKWGALRRVITTRRLVSTFGSQPRSNNKDIKIPI
LERLNSGDVLVGDGGMTYALEKRGYVTAAQWTPEAVVEHPEAGRVFCLIG
KGTLKEKVLLYASQG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007763XLOC_007763Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00013909TCONS_00013909Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003726HCY_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003726Homocysteine-binding domainGENE3D3.20.20.330coord: 38..99
e-value: 3.9E-7
score: 28.9
IPR003726Homocysteine-binding domainSUPERFAMILY82282Homocysteine S-methyltransferasecoord: 49..92

Blast
[Close]
BLAST of TCONS_00013909-protein vs. Swiss-Prot (Human)
Match: BHMT1 (Betaine--homocysteine S-methyltransferase 1 OS=Homo sapiens GN=BHMT PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.101e-17
Identity = 35/56 (62.50%), Postives = 41/56 (73.21%), Query Frame = 0 
Query:   39 PRSNNKDIKIPILERLNSGDVLVGDGGMTYALEKRGYVTAAQWTPEAVVEHPEAGR 94
            P    K  K  ILERLN+G++++GDGG  +ALEKRGYV A  WTPEA VEHPEA R
Sbjct:    2 PPVGGKKAKKGILERLNAGEIVIGDGGFVFALEKRGYVKAGPWTPEAAVEHPEAVR 57
The following BLAST results are available for this feature:
BLAST of TCONS_00013909-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BHMT12.101e-1762.50Betaine--homocysteine S-methyltransferase 1 OS=Hom... [more]
back to top