TCONS_00013906-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00013906-protein
Unique NameTCONS_00013906-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length782

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00013906-protein ID=TCONS_00013906-protein|Name=TCONS_00013906-protein|organism=Clytia hemisphaerica|type=polypeptide|length=782bp
MATATAVVEILSDINFSKELSQTPSEQLVVVDFYAEWCGPCKYVAPILAE
LSLKYKNVKFLKVDVDKCQATSVANGIEAMPTFLFFKNNTKIDSLRGADT
KRLEQIIVTHMGKYITEPDPVRVATGRSYQCFEDLSKNEPSVFKETGGII
LRYANNILRDPENMKYRQIRLENKIIMEKVLPTNGAFDTFFTMGFQEMDD
KLFLPHGSNLEVVHQIRDALTDAFKNLDKDENNKTTPQTSSSAVSETAST
VCSTSNTASCRSTLLESVPVPGKRKLRFNPAGLNNHKTQFFHSLSSHTNQ
VLLYEEEALQIIARSHIPLDELKTKAEKEYSKTKNLNSTSSYEDCLLLEM
LTWFKNDFFSWMNSPKCTRCESETKSIGMLQPSPDDLKWGAGRVEGYQCK
VCGTQVRFRRYNHPQKLLETRTGRCGEWANCFTLCCRAVGLEARYVLDWT
DHVWTEVYSKSKKRWLHCDSCENSCDKPLTYEAGWGKELSYVVAFSKDEV
IDVTWRYTNKFADVMKRRNKVPEKWIIDMCQSITKELQYGATEAERQEFT
TRHIKEIVEFISPKGVKVEEQQGRQSGSTNWRSMRGEMGDPSKLGYSFKL
SDEHKRNKRFRMRYNPVKDEYYTNTSEMIRSNEPATVEGWSNGLLAIENI
HRKVEHDWKMVYLARTEGTNYANLQWRLDLKNSGFKVKRLTIDADMKCFE
TGQIVFNVSTDGIFKLCNQQSKQEGFTFSTSEFKGEDEHVTITAHLSGGK
GDVAWQHTQLFRTSLDVSDYIGLEIDVELDEK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007761XLOC_007761Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00013906TCONS_00013906Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006588Peptide_N_glycanase_PAW_dom
IPR018997PUB_domain
IPR002931Transglutaminase-like
IPR013766Thioredoxin_domain
IPR017937Thioredoxin_CS
IPR012336Thioredoxin-like_fold
IPR008979Galactose-bd-like
Vocabulary: Biological Process
TermDefinition
GO:0006516glycoprotein catabolic process
GO:0045454cell redox homeostasis
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0006516 glycoprotein catabolic process
cellular_component GO:0005737 cytoplasm
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00421THIOREDOXINcoord: 37..46
score: 64.78
coord: 76..87
score: 42.36
coord: 29..37
score: 60.99
NoneNo IPR availableGENE3D2.20.25.10coord: 363..412
e-value: 2.4E-18
score: 65.7
NoneNo IPR availableGENE3D3.40.30.10coord: 3..130
e-value: 2.0E-27
score: 95.3
NoneNo IPR availableSFLDSFLDG00337Thioredoxin-likecoord: 7..108
e-value: 1.5E-31
score: 103.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 228..248
NoneNo IPR availableCDDcd02947TRX_familycoord: 15..107
e-value: 7.81535E-32
score: 118.815
NoneNo IPR availableSUPERFAMILY54001Cysteine proteinasescoord: 286..562
IPR006588Peptide N glycanase, PAW domainSMARTSM00613cppneu5coord: 604..702
e-value: 0.0019
score: 10.5
IPR006588Peptide N glycanase, PAW domainPFAMPF04721PAWcoord: 573..779
e-value: 8.4E-57
score: 192.1
IPR006588Peptide N glycanase, PAW domainPROSITEPS51398PAWcoord: 570..782
score: 23.872
IPR018997PUB domainSMARTSM00580PGNneucoord: 145..206
e-value: 5.0E-12
score: 56.0
IPR018997PUB domainPFAMPF09409PUBcoord: 144..211
e-value: 7.9E-16
score: 57.7
IPR018997PUB domainSUPERFAMILY143503PUG domain-likecoord: 131..224
IPR002931Transglutaminase-likeSMARTSM00460TG_5coord: 417..472
e-value: 1.0E-15
score: 68.2
IPR002931Transglutaminase-likePFAMPF01841Transglut_corecoord: 405..469
e-value: 2.0E-12
score: 47.4
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 8..107
e-value: 2.0E-27
score: 95.1
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 1..112
score: 11.979
IPR017937Thioredoxin, conserved sitePROSITEPS00194THIOREDOXIN_1coord: 30..48
IPR012336Thioredoxin-like foldSUPERFAMILY52833Thioredoxin-likecoord: 7..110
IPR008979Galactose-binding domain-likeSUPERFAMILY49785Galactose-binding domain-likecoord: 601..780

Blast
[Close]
BLAST of TCONS_00013906-protein vs. Swiss-Prot (Human)
Match: NGLY1 (Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase OS=Homo sapiens GN=NGLY1 PE=1 SV=1)

HSP 1 Score: 502.671 bits (1293), Expect = 3.585e-169
Identity = 290/671 (43.22%), Postives = 390/671 (58.12%), Query Frame = 0 
Query:  134 DLSKNEPSVFKETGGIILRYANNILRDPENMKYRQIRLENKIIMEKVLPTNGAFDTFFTMGFQEMDDKLFLPHGSNLEVVHQIRDALTDAFKNLDKDENNKTTPQTSSSAVSETASTVCSTSNTASCRSTLLESVPVPGKRKLRFNPAGLNNH-------------------KTQFFHSLSSHTNQVLLYEEEALQIIARSHIPLDELKTKAEKEYSKTKNLNS--TSSYEDCLLLEMLTWFKNDFFSWMNSPKCTRCESETKSIGM-LQPSPDDLKWGAGRVEGYQCKVCGTQVRFRRYNHPQKLLETRTGRCGEWANCFTLCCRAVGLEARYVLDWTDHVWTEVYSKSKKRWLHCDSCENSCDKPLTYEAGWGKELSYVVAFSKDEVIDVTWRYTNKFADVMKRRNKVPEKWIIDMCQSITKELQYGATEAERQEFTTRHIKEIVEFISPKGVKVEEQQGRQSGSTNWRSMRGEMGDPSKLGYSFKLSDEHKRNKRFRMRYNPVKDEYYTNTSEMIRSNEPATVEGWSNGLLAIENIHRKVEHDWKMVYLARTEGTNYANLQWRLDLKNSGFKVKRLTIDADMKCFETGQIVFNVSTD-GIFKLCNQQSKQEGFTFSTSEFKGEDEHVTITAHLSGGKGDVAWQHTQLFRTSLDVSDYIGLEIDVELDE 781
            +L +N P  F E   ++L YA+NILR+P + KYR IR+ N     ++LP  GA +  F MGF+E +  L  P  +++E + +IRD +                 ++S    S  +  V S+   A+  ST L + P         NP+GLN H                    +     L S+   VL+YE  ALQ  A + IP+ ELK K++++ S+ + L+     S ED LLLE+L WFK +FF W+N+  C++C  +T+S    L PS D+LKWGA  VE + C  C    RF RYN+P+KLLETR GRCGEWANCFTLCCRAVG EARYV D+TDHVWTEVYS S++RWLHCD+CE+ CDKPL YE GWGK+LSYV+AFSKDEV+DVTWRY+ K  +V+ RR KV E  + D    + K+ Q   +E  R+E   R I E+VEFISPK  K  E  GR SGS  WR  RGEMG   K        +E K +K+  + YN VKD Y      +  SN   T+ GW NG+  +E+I RKVE DW MVYLAR EG+++A + W+ +  + G KV  ++I    + F+TG + + + +D    +L    S       S ++F G  E V + A LS G GDVAWQHTQLFR SL+  +   LEI ++  +
Sbjct:   19 ELCQNTPETFLEASKLLLTYADNILRNPNDEKYRSIRIGNTAFSTRLLPVRGAVECLFEMGFEEGETHLIFPKKASVEQLQKIRDLIA--------------IERSSRLDGSNKSHKVKSSQQPAA--STQLPTTPSS-------NPSGLNQHTRNRQGQSSDPPSASTVAADSAILEVLQSNIQHVLVYENPALQEKALACIPVQELKRKSQEKLSRARKLDKGINISDEDFLLLELLHWFKEEFFHWVNNVLCSKCGGQTRSRDRSLLPSDDELKWGAKEVEDHYCDACQFSNRFPRYNNPEKLLETRCGRCGEWANCFTLCCRAVGFEARYVWDYTDHVWTEVYSPSQQRWLHCDACEDVCDKPLLYEIGWGKKLSYVIAFSKDEVVDVTWRYSCKHEEVIARRTKVKEALLRDTINGLNKQRQLFLSENRRKELLQRIIVELVEFISPKTPKPGELGGRISGSVAWRVARGEMGLQRKETLFIPCENE-KISKQLHLCYNIVKDRY------VRVSNNNQTISGWENGVWKMESIFRKVETDWHMVYLARKEGSSFAYISWKFECGSVGLKVDSISIRTSSQTFQTGTVEWKLRSDTAQVELTGDNS-----LHSYADFSGATE-VILEAELSRGDGDVAWQHTQLFRQSLNDHEENCLEIIIKFSD 653
The following BLAST results are available for this feature:
BLAST of TCONS_00013906-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NGLY13.585e-16943.22Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagin... [more]
back to top