TCONS_00013852-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00013852-protein
Unique Name	TCONS_00013852-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	453

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00013852-protein ID=TCONS_00013852-protein|Name=TCONS_00013852-protein|organism=Clytia hemisphaerica|type=polypeptide|length=453bp
LEVLIKQMMINFGKWCFGVVCFICLLVVIRCSSQRFDDNLRYDISWNGPL
TEQTEPGSHHERVMITTKDNEKYQCLIPQLKTEAEDFDIDFGPAPEVLLS
DVLEATPKKCSYRLEPYWTYEVCHGQSVIQFHEEKDKDGGIKRDEYILGK
MSNELLQELLKRASSDSSSNENKKKIPTKKIEGQETPYYSMEMTDGTPCD
INGEPRKSYVLYVCHLSANNEVISVKEMTTCEYEIIVLSSVLCANPAYIV
KKEPINDIQCHALPGHPSRPNSLIEQFNEDSLYRTSSTPRSSSEQKKALP
PQETKPSNDESLNKNFLSGDYCLIGGTGWWSYEFCNGKFVQQFHVESSKA
KTIIKLGYWNKQNHIKKVEEGVFVPKGKNHVMHYYTGGDICDLTGAPRTA
LVILTCIKGKGQQLSIYMSEPHPCQYTIGVESPILCPFVEKADKNGLFEQ
KKK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_007739	XLOC_007739	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00013852	TCONS_00013852	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR009011	Man6P_isomerase_rcpt-bd_dom
IPR012913	PRKCSH

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009011	Mannose-6-phosphate receptor binding domain	GENE3D	2.70.130.10		coord: 31..247 e-value: 1.9E-21 score: 76.7 coord: 278..438 e-value: 6.4E-21 score: 75.0
IPR009011	Mannose-6-phosphate receptor binding domain	SUPERFAMILY	50911	Mannose 6-phosphate receptor domain	coord: 188..243
IPR009011	Mannose-6-phosphate receptor binding domain	SUPERFAMILY	50911	Mannose 6-phosphate receptor domain	coord: 319..437
IPR012913	Glucosidase II beta subunit-like	PFAM	PF07915	PRKCSH	coord: 109..199 e-value: 7.9E-16 score: 58.7 coord: 320..391 e-value: 2.7E-12 score: 47.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 284..311

Blast

[Close]

BLAST of TCONS_00013852-protein vs. Swiss-Prot (Human)
Match: ERLEC (Endoplasmic reticulum lectin 1 OS=Homo sapiens GN=ERLEC1 PE=1 SV=1)

HSP 1 Score: 307.76 bits (787), Expect = 4.759e-100
Identity = 168/453 (37.09%), Postives = 251/453 (55.41%), Query Frame = 0

Query:   35 RFDDNLRYDISWNGPLTEQTEPGS-----HHERVMITTKDNEKYQCLIPQLKTEAEDFDIDF-GPAPEVLLSDVLEATPKKCSYRLEPYWTYEVCHGQSVIQFHEEKDKDGGIKRDEYILGKMSNELLQELLKRASSDSSSNENKKKIPTKKIEGQETPYYSMEMTDGTPCDI-NGEPRKSYVLYVCHLSANNEVISVKEMTTCEYEIIVLSSVLCANPAYIVKKEPINDIQCHALPGHPSRPNSLIEQFNEDSLYRTSSTPRSSSEQKKALPPQETKPS-----------------------NDESLNKNFLSGDYCLIGGTGWWSYEFCNGKFVQQFHVESSKAKTIIKLGYWNKQNHIKKVEEGVFVP--------KGKNHVMHYYTGGDICDLTGAPRTALVILTCIKGKG-QQLSIYMSEPHPCQYTIGVESPILCPFVEKADKNGLF 448
            +  D++ + ++W G  TE + P +         V++TT   EKY+C++P + +  E+ + D+ GP P  LL  + + +   CSYR+E YWTYEVCHG+ + Q+HEEK+    I   EY LG M   L + LL     ++   E   +IPTK IEGQ TPYY + M +GTPC +    PR S V+Y+CH  + +E++SV E+TTCEYE+++L+ +LC++P Y  +  P+NDI C +LPG P +P +L +   ++ + R     R + E+      +E  P+                        D+ L K FLSG YC  GG GWW YEFC GK V Q+H +    KT + +G WN++ HI+  ++             +    V H+Y  GDICD+T  PR   V L C +      +++YM EPH CQY +GVESP++C  ++ AD+NGL 
Sbjct:   36 QLSDDIPFRVNWPG--TEFSLPTTGVLYKEDNYVIMTTAHKEKYKCILPLVTSGDEEEEKDYKGPNPRELLEPLFKQS--SCSYRIESYWTYEVCHGKHIRQYHEEKETGQKINIHEYYLGNM---LAKNLLFEKEREAEEKEKSNEIPTKNIEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPESKHEILSVAEVTTCEYEVVILTPLLCSHPKYRFRASPVNDIFCQSLPGSPFKPLTLRQLEQQEEILRVPF--RRNKEEDLQSTKEERFPAIHKSIAIGSQPVLTVGTTHISKLTDDQLIKEFLSGSYCFRGGVGWWKYEFCYGKHVHQYHEDKDSGKTSVVVGTWNQEEHIEWAKKNTARAYHLQDDGTQTVRMVSHFYGNGDICDITDKPRQVTVKLKCKESDSPHAVTVYMLEPHSCQYILGVESPVICKILDTADENGLL 479

The following BLAST results are available for this feature:

BLAST of TCONS_00013852-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00013852-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ERLEC	4.759e-100	37.09	Endoplasmic reticulum lectin 1 OS=Homo sapiens GN=...	[more]

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TCONS_00013852-protein (polypeptide) - C. hemisphaerica