TCONS_00013823-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00013823-protein
Unique NameTCONS_00013823-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length259

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00013823-protein ID=TCONS_00013823-protein|Name=TCONS_00013823-protein|organism=Clytia hemisphaerica|type=polypeptide|length=259bp
FSTDLGGNVEKGGKWSPTCKPRRKVAIIVPFRNRTEQLKIFLRHMHPFLH
RQELLYQIFVVEQLGIDTFNRGGLSNIGYVESLKMNKEFDCFIFTDIDLL
PENDHNYYGCPRSPRHMSVAIDTFNYKLPYGIIFGGVGAWYKEDFEKING
YSMAYWGWGGEDDDLFYRVHHAKLKFNRAPVEIGRYKMVKVHHFRSSKPN
PIRVELLRNSTQRMYSDGLNTLRYKLKKISELPLYTLVQIEFKKELYFKD
GKYIAKVLN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007726XLOC_007726Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00013823TCONS_00013823Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003859Galactosyl_T
IPR029044Nucleotide-diphossugar_trans
IPR027995Galactosyl_T_N
IPR027791Galactosyl_T_C
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016757transferase activity, transferring glycosyl groups
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003859Beta-1,4-galactosyltransferasePRINTSPR02050B14GALTRFASEcoord: 128..149
score: 43.16
coord: 150..168
score: 63.87
coord: 91..110
score: 54.51
coord: 59..78
score: 47.79
IPR029044Nucleotide-diphospho-sugar transferasesGENE3D3.90.550.10coord: 5..246
e-value: 1.7E-39
score: 135.4
IPR029044Nucleotide-diphospho-sugar transferasesSUPERFAMILY53448Nucleotide-diphospho-sugar transferasescoord: 15..243
IPR027995Galactosyltransferase, N-terminalPFAMPF13733Glyco_transf_7Ncoord: 8..111
e-value: 3.4E-43
score: 146.4
IPR027791Galactosyltransferase, C-terminalPFAMPF02709Glyco_transf_7Ccoord: 115..192
e-value: 6.6E-28
score: 96.1
NoneNo IPR availableCDDcd00899b4GalTcoord: 22..236
e-value: 1.79007E-109
score: 316.831

Blast
[Close]
BLAST of TCONS_00013823-protein vs. Swiss-Prot (Human)
Match: B4GT2 (Beta-1,4-galactosyltransferase 2 OS=Homo sapiens GN=B4GALT2 PE=1 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 9.701e-74
Identity = 101/237 (42.62%), Postives = 157/237 (66.24%), Query Frame = 0 
Query:    9 VEKGGKWSPT-CKPRRKVAIIVPFRNRTEQLKIFLRHMHPFLHRQELLYQIFVVEQLGIDTFNRGGLSNIGYVESLKMNKEFDCFIFTDIDLLPENDHNYYGCPRSPRHMSVAIDTFNYKLPYGIIFGGVGAWYKEDFEKINGYSMAYWGWGGEDDDLFYRVHHAKLKFNRAPVEIGRYKMVKVHHFRSSKPNPIRVELLRNSTQRMYSDGLNTLRYKLKKISELPLYTLVQIEFKK 244
            V  GG+++P  C P + VA+I+PFR+R   L+ +L ++HP L RQ L Y ++V+ Q G DTFNR  L N+G++E+LK +  +DCFIF+D+DL+P +D N Y C   PRH ++A+D F ++LPY   FGGV    K  F +ING+   YWGWGGEDDD+F R+    +K +R  + IGRY+M+K    + ++PNP R   ++N+   M  DG+ ++RY++ ++S  PL+T + ++  +
Sbjct:  128 VLMGGRYTPPDCTPAQTVAVIIPFRHREHHLRYWLHYLHPILRRQRLRYGVYVINQHGEDTFNRAKLLNVGFLEALKEDAAYDCFIFSDVDLVPMDDRNLYRCGDQPRHFAIAMDKFGFRLPYAGYFGGVSGLSKAQFLRINGFPNEYWGWGGEDDDIFNRISLTGMKISRPDIRIGRYRMIKHDRDKHNEPNPQRFTKIQNTKLTMKRDGIGSVRYQVLEVSRQPLFTNITVDIGR 364
The following BLAST results are available for this feature:
BLAST of TCONS_00013823-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
B4GT29.701e-7442.62Beta-1,4-galactosyltransferase 2 OS=Homo sapiens G... [more]
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