TCONS_00013778-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00013778-protein
Unique NameTCONS_00013778-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length843

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00013778-protein ID=TCONS_00013778-protein|Name=TCONS_00013778-protein|organism=Clytia hemisphaerica|type=polypeptide|length=843bp
METHRENYIMSMSKVLKDVKNLIFEESPSGYGGINTIAPMVAGDSSDDET
DDEDNGTQWGRVKKDIIVGEEEGLYSPSAAPPSPTQHVPVLGGPFSALIS
SMWPQETLGQCQQTEDSGVHPECEYDEFGFRIDRSQEEDTEEDPDPLTCV
ASEDPTARFKWIAYIESIQKGVVGDLTWDKVDRSLERTDKLKELVYNGIP
HSMRVHLWPRLSGALKKKHESEISYRKIVKKSEDEDSLILSQIEKDLCRT
MPSNACFQDLNSIGIGKLKRILLSVAWLYPDIGYCQGMGMIAASLLLFVE
EETTFWIMVAIIEDLLPSSYFSSTLIGVQVDQRVLRQLIANYMPSLDDAM
KEHDIEISLITLHWFLTAMASVLQHKVLLRVWDIFFYEGSIALFKLTLGM
MKYKEKALSSLENSAQIFNLLSDLPGEITDVELLLEYSEKASASLTNIIL
ETHRKKHYAFLLAEANNRQDAINNNNQEILRRTARPSKRTWVNTMYNIGQ
HVYLNNLLCGTGRSNMMHLPMKAKNVSQTETIIELRESILLIARHFDFRG
TKTELLPDYSRDANANDYDNFMNSVKLKHRRAKALIDFERHEDDELGFRK
NDLITIVSQKDEHCWIGELNGLRGWFPAKFVQILDERSKEYSSAGDDTVT
ETICDLVRGRLYHAMKRIFDHGFRHSVFGNKHPWHFVEAASKEEVIKDYQ
SVYSRLVLCKTFKLDEDGKVLGPEELLYRAVQAINSSHDEAKADLDVKLR
SLICYGLNEQVLHLWFELFCLVKDINQNWYDEASFIRSPGWIQIKCELRI
LSQFSFNLSIDSELDEAPKKTSVNMKGDVQDMLVKHHLFSWDL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007694XLOC_007694Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00013778TCONS_00013778Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000195Rab-GTPase-TBC_dom
IPR004012Run_dom
IPR001452SH3_domain
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 462..482
NoneNo IPR availableGENE3D2.30.30.40coord: 577..642
e-value: 5.6E-20
score: 70.1
NoneNo IPR availableGENE3D1.10.10.750coord: 157..199
e-value: 3.4E-8
score: 32.8
NoneNo IPR availableGENE3D1.10.8.270coord: 200..313
e-value: 1.2E-23
score: 83.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..63
NoneNo IPR availableCDDcd11813SH3_SGSM3coord: 581..633
e-value: 3.58292E-31
score: 116.059
NoneNo IPR availableSUPERFAMILY140741RUN domain-likecoord: 727..813
coord: 660..690
IPR000195Rab-GTPase-TBC domainSMARTSM00164tbc_4coord: 195..412
e-value: 7.0E-57
score: 205.0
IPR000195Rab-GTPase-TBC domainPFAMPF00566RabGAP-TBCcoord: 202..408
e-value: 1.9E-48
score: 164.9
IPR000195Rab-GTPase-TBC domainPROSITEPS50086TBC_RABGAPcoord: 198..389
score: 34.767
IPR000195Rab-GTPase-TBC domainSUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 179..346
IPR000195Rab-GTPase-TBC domainSUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 325..438
IPR004012RUN domainSMARTSM00593893paper3coord: 749..811
e-value: 3.0E-12
score: 56.7
IPR004012RUN domainPFAMPF02759RUNcoord: 661..811
e-value: 3.7E-22
score: 78.6
IPR004012RUN domainPROSITEPS50826RUNcoord: 652..813
score: 25.858
IPR001452SH3 domainSMARTSM00326SH3_2coord: 580..635
e-value: 2.3E-16
score: 70.4
IPR001452SH3 domainPFAMPF00018SH3_1coord: 583..628
e-value: 3.4E-10
score: 39.3
IPR001452SH3 domainPROSITEPS50002SH3coord: 577..636
score: 12.614
IPR001452SH3 domainSUPERFAMILY50044SH3-domaincoord: 579..639

Blast
[Close]
BLAST of TCONS_00013778-protein vs. Swiss-Prot (Human)
Match: SGSM3 (Small G protein signaling modulator 3 OS=Homo sapiens GN=SGSM3 PE=1 SV=1)

HSP 1 Score: 853.973 bits (2205), Expect = 0.000e+0
Identity = 427/767 (55.67%), Postives = 544/767 (70.93%), Query Frame = 0 
Query:   87 HVPVLGGPFSALISSMWPQETLGQCQQTEDSGVHPECEYDEFGFRIDRSQEEDTEEDPDPLTCVAS-----EDPTARFKWIAYIESIQKGVVGDLTWDKVDRSLERTDKLKELVYNGIPHSMRVHLWPRLSGALKKKHESEISYRKIVKKSEDEDSLILSQIEKDLCRTMPSNACFQDLNSIGIGKLKRILLSVAWLYPDIGYCQGMGMIAASLLLFVEEETTFWIMVAIIEDLLPSSYFSSTLIGVQVDQRVLRQLIANYMPSLDDAMKEHDIEISLITLHWFLTAMASVLQHKVLLRVWDIFFYEGSIALFKLTLGMMKYKEKALSSLENSAQIFNLLSDLPGEITDVELLLEYSEKASASLTNIILETHRKKHYAFLLAEANNRQDAINNNNQEILRRTARPSKRTWVNTMYNIGQHVYLNNLLCGTGRSNMMHLPMKAKNVSQTETIIELRESILLIARHF---DFRGTKTELLPDYSRDANANDYDNFMNSVKLKHRRAKALIDFERHEDDELGFRKNDLITIVSQKDEHCWIGELNGLRGWFPAKFVQILDERSKEYSSAGDDTVTETICDLVRGRLYHAMKRIFDHGFRHSVF--GNKHPWHFVEAASKEEVIKDYQSVYSRLVLCKTFKLDEDGKVLGPEELLYRAVQAINSSHDEAKADLDVKLRSLICYGLNEQVLHLWFELFCLVKDINQNWYDEASFIRSPGWIQIKCELRILSQFSFNLSIDSELDEAPKKTSVNMKGDVQDMLVKHHLFSWDL 843
            H P  G PFSAL  S+WPQE L +  Q E+S   PE  YDEFGFR+ +      EE  +P + + +     ED   R +W A++E      VGDLTWDK+  SL R++KL+ LV  GIPH MR  LW RLSGAL+KK  SE+SYR+IVK S +++++   QIEKDL RTMPSNACF  + SIG+ +L+R+L ++AWLYP+IGYCQG GM+AA LLLF+EEE  FW+M AIIEDLLP+SYFS+TL+GVQ DQRVLR LI  Y+P LD  ++EHDIE+SLITLHWFLTA ASV+  K+LLR+WD+FFYEGS  LF+LTLGM+  KE+ L   ENSA IFN LSD+P ++ D ELLL  + + + SLT++ +ET R+KH A+L+A+      A    N   + R     +++ +  +                G  ++  L  KAKN+ QTE + +LRE+IL +ARHF   D +    EL PDYS +++  D++N++   +   RRAKAL+DFERH+DDELGFRKND+ITIVSQKDEHCW+GELNGLRGWFPAKFV++LDERSKEYS AGDD+VTE + DLVRG L  A+K +F+HG +      G  HPW F+E A+  EV +D+ SVYSRLVLCKTF+LDEDGKVL PEELLYRAVQ++N +HD   A +DVKLRSLIC GLNEQVLHLW E+ C      + WY   SF+RSPGW+QIKCELR+L  F+F+LS D EL  A ++    +K  V+DMLVKHHLFSWD+
Sbjct:    5 HTPACG-PFSALTPSIWPQEILAKYTQKEESAEQPEFYYDEFGFRVYK------EEGDEPGSSLLANSPLMEDAPQRLRWQAHLEFTHNHDVGDLTWDKIAVSLPRSEKLRSLVLAGIPHGMRPQLWMRLSGALQKKRNSELSYREIVKNSSNDETIAAKQIEKDLLRTMPSNACFASMGSIGVPRLRRVLRALAWLYPEIGYCQGTGMVAACLLLFLEEEDAFWMMSAIIEDLLPASYFSTTLLGVQTDQRVLRHLIVQYLPRLDKLLQEHDIELSLITLHWFLTAFASVVDIKLLLRIWDLFFYEGSRVLFQLTLGMLHLKEEELIQSENSASIFNTLSDIPSQMEDAELLLGVAMRLAGSLTDVAVETQRRKHLAYLIADQGQLLGAGTLTNLSQVVRRRTQRRKSTITALL--------------FGEDDLEAL--KAKNIKQTELVADLREAILRVARHFQCTDPKNCSVELTPDYSMESHQRDHENYVACSRSHRRRAKALLDFERHDDDELGFRKNDIITIVSQKDEHCWVGELNGLRGWFPAKFVEVLDERSKEYSIAGDDSVTEGVTDLVRGTLCPALKALFEHGLKKPSLLGGACHPWLFIEEAAGREVERDFASVYSRLVLCKTFRLDEDGKVLTPEELLYRAVQSVNVTHDAVHAQMDVKLRSLICVGLNEQVLHLWLEVLCSSLPTVEKWYQPWSFLRSPGWVQIKCELRVLCCFAFSLSQDWEL-PAKREAQQPLKEGVRDMLVKHHLFSWDV 747
The following BLAST results are available for this feature:
BLAST of TCONS_00013778-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SGSM30.000e+055.67Small G protein signaling modulator 3 OS=Homo sapi... [more]
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