TCONS_00013552-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00013552-protein
Unique NameTCONS_00013552-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length505

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00013552-protein ID=TCONS_00013552-protein|Name=TCONS_00013552-protein|organism=Clytia hemisphaerica|type=polypeptide|length=505bp
MATSKEQIHQEEEHARVRNELDVDPSKCSICLFPLPKFSNSNKCKQCLEK
IEAIPTGFQFEVAGTERKEFECPICLCIIRNATELPCEHLMCKDCLEHYE
KGQIDKSEREGREKAEFSCSVCMTPYQVKEKTPVRSTDRMIQTTLPIKCL
QKKCVWTGCIMDYEEHQNRHCNFVVIRCPYYDLGCLTQMERAKLPVHNQA
KRPIHDSLLLTAVSAFTIERKDFKLKMDEQNRKIESLQSLHATTIKRCEN
LEKDNLQLKQRVQRHDEAIRDIKSSLFEMQGNVDSSSDLDSLKKDLGDQS
KEVKNLKIFAEQTSRLHKTFSYPDIQDVFTYLLPDQYEANNEIKQWKLLT
EEVTAKPIDQDCEYLKTLKDSIVRYQGTIYPAKWKTRLTKWRKYIDYGVN
VCCYVKLFLYKNSRKFSLKVFKTTDEFDRTVAKSNKWCKHSNDTASYFDW
KQLILYVAIFAKDFEDAYIVNWEDVNDTKSVATDGRIVPVEEAFVSNGYI
IFSIL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007576XLOC_007576Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00013552TCONS_00013552Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR027370Znf-RING_LisH
IPR017907Znf_RING_CS
IPR008974TRAF-like
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 220..268
NoneNo IPR availableGENE3D1.20.120.330coord: 208..321
e-value: 0.0013
score: 17.9
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 67..145
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 72..122
e-value: 1.5E-4
score: 31.2
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 72..122
score: 9.775
IPR001841Zinc finger, RING-typeCDDcd00162RINGcoord: 71..125
e-value: 0.00330684
score: 34.7288
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 141..197
e-value: 1.8E-10
score: 40.4
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 56..140
e-value: 3.0E-11
score: 42.1
IPR027370RING-type zinc-finger, LisH dimerisation motifPFAMPF13445zf-RING_UBOXcoord: 72..119
e-value: 7.9E-6
score: 25.7
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 87..96
IPR008974TRAF-likeSUPERFAMILY49599TRAF domain-likecoord: 145..201

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00013552-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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