TCONS_00013531-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00013531-protein
Unique NameTCONS_00013531-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length333

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00013531-protein ID=TCONS_00013531-protein|Name=TCONS_00013531-protein|organism=Clytia hemisphaerica|type=polypeptide|length=333bp
MKMASFLRVVFLVSILKRTFGGCSHGKFIQNETGKAVAPQFRPKFMTIAD
SQIQCFLKQKFKDCECWLLEVKTLSTNKYSCRFYLKDDVYSFIEDGSAII
YEQHKNPCQFNQKPGDACYKIPKDCQEIQQRGLEINGVYDIEIDGQTKSV
YCDLTENQGGWTAIQRRVSGDMNFNRNWIEYKNGFGDPATNYWIGLDSIY
ALTNGRTDVLLRVTAESFDGQKAFAVYKGFSIGSESEKFKLTSGDYLDGL
QGKSWTAFTGMFFSTRDVDNDKKSDGNCAISREGGGWYKSCTWLNINGRY
GADATKIGDAYMHWTNFKQHESLKSISLSIKRS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007558XLOC_007558Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00013531TCONS_00013531Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014716Fibrinogen_a/b/g_C_1
IPR014715Fibrinogen_a/b/g_C_2
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 120..333
e-value: 3.3E-59
score: 212.7
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 121..331
e-value: 6.6E-51
score: 173.1
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 116..333
score: 42.889
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainCDDcd00087FReDcoord: 120..325
e-value: 6.78429E-66
score: 207.863
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 115..329
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 52..260
e-value: 1.0E-53
score: 181.7
IPR014715Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2GENE3D4.10.530.10coord: 261..325
e-value: 6.8E-16
score: 57.7

Blast
[Close]
BLAST of TCONS_00013531-protein vs. Swiss-Prot (Human)
Match: TENN (Tenascin-N OS=Homo sapiens GN=TNN PE=1 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 1.315e-39
Identity = 83/217 (38.25%), Postives = 120/217 (55.30%), Query Frame = 0 
Query:  122 PKDCQEIQQRGLEINGVYDIEIDGQTK---SVYCDLTENQGGWTAIQRRVSGDMNFNRNWIEYKNGFGDPATNYWIGLDSIYALTNG---RTDVLLRVTAESFDGQKAFAVYKGFSIGSESEKFKLTSGDYLDGLQGKSWTAFTGMFFSTRDVDNDKKSDGNCAISREGGGWYKSCTWLNINGRYGADATKIGDAYMHWTNFKQHE-SLKSISLSIK 331
            P DC ++QQ     +G+Y I + G       VYCD+  + GGW   QRR +G ++F + W  Y  GFGDP   +W+GLD ++ LT G   R +V  RV  ++ + + A+A+Y  F + S  E++KLT G Y  G  G + T   G  F+T D DND  +  NCA++  GG WYK+C   N NGRYG      G   ++W  +K HE S+  + L I+
Sbjct: 1067 PSDCSQVQQNSNAASGLYTIYLHGDASRPLQVYCDMETDGGGWIVFQRRNTGQLDFFKRWRSYVEGFGDPMKEFWLGLDKLHNLTTGTPARYEV--RVDLQTAN-ESAYAIYDFFQVASSKERYKLTVGKY-RGTAGDALTYHNGWKFTTFDRDND-IALSNCALTHHGGWWYKNCHLANPNGRYGETKHSEG---VNWEPWKGHEFSIPYVELKIR 1275
The following BLAST results are available for this feature:
BLAST of TCONS_00013531-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TENN1.315e-3938.25Tenascin-N OS=Homo sapiens GN=TNN PE=1 SV=2[more]
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