TCONS_00013512-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00013512-protein
Unique NameTCONS_00013512-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length634

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00013512-protein ID=TCONS_00013512-protein|Name=TCONS_00013512-protein|organism=Clytia hemisphaerica|type=polypeptide|length=634bp
MGRHLSTILSVLLLVVLANAHPHRHRYDGLDPQCPVSITTNRQSCAAMRL
VDIQRARYWYQLTDGNTKTPSQTSFLFKNDIPWLNQSTDAIQYYYAIDPF
ESRYMMLLATMRNIVTEKIMPPLFQAFKSFPFVTNREYVALHQAWNGALA
QLRTQQYFANPTQYPDFTDHSTNKYWETDDAFTQRRLAGICPIFMKKVYC
DETEKRGITFERLESVLNMRFFENFKMKINDHVELTIEQALADERLFVQY
IDEMDDFMNSIDLTDANRTDSRQLRKVRSPIAVFILKEDGNLAVVAIQED
PNNDSRVLTPSNSQAQEWLLLKAQVEQTAIQYCHGKVHLGSVHFVTTIYC
LSFRRHLSTRHPLYNFFKYHCEGTVPHITLTFNSVTEKGESIDQIFAVGA
NGPRILAKKAIDERNYETFTFDGFIKGQGMDDRRIKYYPFRDDAAVLLAE
YGRFAKEWVESIYDHHNCIKDDHELQGWVAELSDSSKGKMVGFPTTFYKK
KQLETFLQRFLWYNVIHTAVNYATPEFRPVSPIKLYEDKSGIPLTLLQSL
PSAVHSLTATTFLGTLASFRINRIFGYWEQITDQKFRKIIRKYQHRLITN
VQKTLAQRNAQRKANNQLGYQYLEPRWLTNSIHI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007545XLOC_007545Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00013512TCONS_00013512Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013819LipOase_C
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0016702oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.245.10coord: 331..634
e-value: 2.0E-40
score: 138.5
NoneNo IPR availableGENE3D3.10.450.60coord: 210..328
e-value: 2.6E-10
score: 40.0
IPR013819Lipoxygenase, C-terminalPFAMPF00305Lipoxygenasecoord: 163..617
e-value: 3.2E-22
score: 78.7
IPR013819Lipoxygenase, C-terminalPROSITEPS51393LIPOXYGENASE_3coord: 176..634
score: 34.625
IPR013819Lipoxygenase, C-terminalSUPERFAMILY48484Lipoxigenasecoord: 123..634

Blast
[Close]
BLAST of TCONS_00013512-protein vs. Swiss-Prot (Human)
Match: LOX5 (Arachidonate 5-lipoxygenase OS=Homo sapiens GN=ALOX5 PE=1 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 7.225e-29
Identity = 116/482 (24.07%), Postives = 214/482 (44.40%), Query Frame = 0 
Query:  175 YWETDDAFTQRRLAGICPIFMKKVYCDE-TEKRGITFERLESVLNMRFFENFKMKINDHVELTIEQALADERLFVQYIDEMDDFMNSIDLTDANRTDSRQLRKVRSPIAVFILKEDGNLAVVAIQ--EDPNNDSRVLTPSNSQAQEWLLLKAQVEQTAIQYCHGKVHLGSVHFVTTIYCLSFRRHLSTRHPLYNFFKYHCEGTVPHITLTFNSVTEKGESIDQIFAVGANGPRILAKKAIDERNYETFTFDGFIKGQGMDDRR-IKYYPFRDDAAVLLAEYGRFAKEWVESIYDHHNCIKDDHELQGWVAEL-SDSSKG-KMVGFPTTFYKKKQLETFLQRFLW-YNVIHTAVNY-----------ATPEFRPVSPIKLYEDKSGIPLT-LLQSLPSAVHSLTATTFLGTLASFRINRIF-GYW--EQITDQKFRKIIRKYQHRLITNVQKTLAQRNAQRKANNQLGYQYLEPRWLTNSIHI 634
            +W+ D  F  + L G  P+ +++  C E  EK  +T E +E  L                +L++EQ +    +F+       DF   +D  DAN+TD   L+ + +PI +        +  +AIQ  + P +++ +  PS+++  +WLL K  V  +         HL   H V+ ++ ++  R L   HP++     H   T+   T     +  +    D+  A G  G   + ++A+ +  Y +  F   IK +GM+ +  I YY +RDD  ++      F  E V+  Y+    +++D ELQ +V ++     +G K  GFP +   ++QL  +L   ++  +  H AVN+           A P  R   P      K  + +  ++ +LP    S      +  L+ F+ N +F G +  E   ++  ++ + +++  L   +   +A+RN ++    QL Y YL P  + NS+ I
Sbjct:  226 HWQEDLMFGYQFLNGCNPVLIRR--CTELPEKLPVTTEMVECSLER--------------QLSLEQEVQQGNIFIV------DF-ELLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIPGDENPIFLPSDAK-YDWLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQLPAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFDKANATGGGGHVQMVQRAMKDLTYASLCFPEAIKARGMESKEDIPYYFYRDDGLLVWEAIRTFTAEVVDIYYEGDQVVEEDPELQDFVNDVYVYGMRGRKSSGFPKSVKSREQLSEYLTVVIFTASAQHAAVNFGQYDWCSWIPNAPPTMRAPPPTA----KGVVTIEQIVDTLPDRGRSCWHLGAVWALSQFQENELFLGMYPEEHFIEKPVKEAMARFRKNL-EAIVSVIAERNKKK----QLPYYYLSPDRIPNSVAI 674
The following BLAST results are available for this feature:
BLAST of TCONS_00013512-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LOX57.225e-2924.07Arachidonate 5-lipoxygenase OS=Homo sapiens GN=ALO... [more]
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