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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00013492-protein ID=TCONS_00013492-protein|Name=TCONS_00013492-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1915bp
MFPLYGRILLSGEFNRLQTLPVSGRSFRFDTENPCPSGTFRNQTHGQEHS
DCFPCLPGQYCANTGMEKPSGPCAPGFYCVRGSKSRMPLEYDNFTSGDCL
CPTNTTGGECQPGFYCPEGSYEPTPCDGGYYCAGKRNHNSSTPCQPGFYC
SGGSAVPNPRDGIHGNVCPEGKYCEEKTEIPTDCPAGRYSNATGNMELND
CSLCEPGKYCQGLGNTEPTAPCDQGFYCPAGQSQKDPPAYVCQPGHKCPT
GSPAQELCESGTWTDLTKQWECKICIEGYYCDRKDAQVTPISDYTRYPCP
NGFYCLNGTRFSTEYGCPNGTYGNGTKLTRPDQCLPCPAGKYCLGASPTY
TDDCDAGHHCIGGSFVPNPVDGVRGVACPEGKYCLKGTATPSNCPSGTFN
NNTGLKAESECTPCSPGMYCLANGLTYPTEKCDERYFCEAGAQYPKPQDT
STAGNCTAGHYCPRGTYKPIPCEDGTYMPNILAKECFECPVGSYCVGDHL
TPIPCPAGFYCPAGTGFDWKSCPPGSFNAEVGLHNSSSCQPCLGGMYCPH
YNATYPEGFCAPGYFCEEGSDTDKPESNHLGIAGPCTPGNYCPINTTHPL
PCPKGRYSNQTHLKESNDCSPCDPGMYCGTQGLQEPTGPCDAGFYCLDGS
EVRNPPTVTSSGGPCWVGHYCTNGTSYPITCAPGTFNDRTGQSECDKCCE
GYYCPKNTTTCVNECPMGFYCPKGTSQPDAFPCPAGTYNNKTRRTSPEDC
TPCDPGMYCPSAGLTDPFDECDAGWYCRRGAWSNRPIDIGNFTDGCYCSN
VSTGGQCQPGFYCPKKSNEPLPCPAGRFCLTIGLPVPSGLCQAGFYCTSQ
ASSRAPTDNITGNICPAGAYCDEGTGVPKKCAPGSYSSQTGNTRPEDCLS
CEEGKFCDGWGLEYPSGNCSAGFYYPPGQNTSTPEEHRCTPGYYCPPGSK
DKIPCPAGSYQDELYSQVCKECPEGYFCDGLILNDTHCQHGVQFPQKCPQ
GFFCRPQSKTGKENACPKGTYGNRTGLAYQSECTDCPAGKYCGSTGLPSW
TDDCDAGFFCKRNAEISAPNDGTTGIVCPTGHYCLRGTTSEEPCPSGTFN
PSTGLGAMSECLSCNSGQYCGGVGLNKTSGNCSAGYYCSHNATSPTPTDG
ATGDVCPLGSYCPVGTGVPKQCTAGTYMNETQAERCLDCPPRFFCTNRIN
PEPCSAGFYCPGNTGYDQQPCPTGSYSPLERLQSSIECLPCPAGQFCNQI
NATVPSGPCQAGFFCHNGSDTATPSGGHRGFAGPCPAGRYCEAGDPKAPV
LCPAGIFNNETHGQNLTDCTPCSAGKYCETAGLRSPTGECEQGFYCRKGS
SVANPSVKTDDHGPCPIGHYCPANTGNPYKCPVGTYNGLEQQSQCVDCPS
GHFCEHGASNYTECPQGYYCPNGSTIACPEGTFKNFTKGSSLDDCKPCPP
GQYCQGVAQINPTDACAGGWYCSGGSWTDKPTGNEIYNGTWTCPLYNIGG
RCLRGTFCPPGSPSAQQCTPGFYCHQDEAHNVSGSCGKGHYCSGGTIEQY
PFNQTYGDICPPGHYCVEGSKAAEACREGNDDPNACQHCTAGMYCDRSGL
PEPYGNCSLGYYCPPGQVSPTPADKRCQPGHYCPVASQDHYVCEAGTYQP
DAAKGECFDCPPGSYCDPTEAVAVNASGTNSSSHGVVNPSICPKGYFCPH
KTITYKAFPCQKGYFGNRTSLQSHDDCYPCTPGYFCDRQGMVTPQDKCHV
GYYCSEKAFSPEPRNETEGGGPCLPGFYCESGYSRPLPCPKGTYGAAMHL
GHLNECTECDGGQFCPEDGASAPNGSCLAGYYCKGRAILSNPVGESYGDE
CPSGFYCPVGTTTPYACPPGTFNNQTTATRPEDCLPCEGGKYCCGYANEN
PDDICDEGYYCRSGG Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005576 | extracellular region |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006030 | chitin metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008061 | chitin binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006030 |
chitin metabolic process |
| cellular_component |
GO:0005576 |
extracellular region |
| molecular_function |
GO:0008061 |
chitin binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR011641 | Tyrosine-protein kinase ephrin type A/B receptor-like | SMART | SM01411 | GCC2_GCC3_2 | coord: 1854..1915
e-value: 2.8
score: 13.0
coord: 1695..1748
e-value: 8.3
score: 8.7
coord: 1159..1204
e-value: 1.7E-4
score: 31.0
coord: 245..299
e-value: 0.04
score: 23.1
coord: 381..432
e-value: 1.9E-4
score: 30.8
coord: 1776..1827
e-value: 0.0035
score: 26.6
coord: 589..640
e-value: 3.8
score: 11.7
coord: 187..242
e-value: 16.0
score: 6.2
coord: 1505..1576
e-value: 1.6
score: 15.2
coord: 302..354
e-value: 2.4
score: 13.5
coord: 1417..1465
e-value: 8.8E-4
score: 28.6
coord: 1288..1340
e-value: 4.1
score: 11.4
coord: 668..715
e-value: 5.0E-7
score: 39.3
coord: 1001..1054
e-value: 0.28
score: 20.3
coord: 1081..1132
e-value: 2.0E-4
score: 30.7
coord: 459..505
e-value: 2.2E-7
score: 40.5
coord: 508..560
e-value: 5.7
score: 10.2
coord: 113..184
e-value: 0.0085
score: 25.3
coord: 810..855
e-value: 10.0
score: 7.9
coord: 868..919
e-value: 0.02
score: 24.1
coord: 1207..1259
e-value: 0.23
score: 20.6
coord: 1368..1414
e-value: 1.7E-8
score: 44.2
coord: 38..89
e-value: 5.1
score: 10.6
coord: 942..988
e-value: 4.9E-8
score: 42.7
coord: 1630..1685
e-value: 0.0019
score: 27.4
coord: 718..771
e-value: 3.9E-5
score: 33.0 |
| None | No IPR available | GENE3D | 2.10.50.10 | | coord: 722..796
e-value: 3.8E-14
score: 52.4
coord: 93..119
e-value: 0.2
score: 11.6
coord: 512..580
e-value: 1.3E-13
score: 50.7
coord: 1420..1492
e-value: 1.8E-13
score: 50.2
coord: 1699..1769
e-value: 3.3E-12
score: 46.1
coord: 306..374
e-value: 1.9E-11
score: 43.7
coord: 120..162
e-value: 2.1E-4
score: 21.1 |
| None | No IPR available | GENE3D | 2.10.50.10 | | coord: 939..1004
e-value: 8.3E-14
score: 51.2
coord: 1627..1698
e-value: 4.0E-13
score: 49.0
coord: 665..721
e-value: 3.1E-14
score: 52.6
coord: 1380..1419
e-value: 1.9E-16
score: 59.6
coord: 586..655
e-value: 2.5E-14
score: 52.9
coord: 242..305
e-value: 5.5E-12
score: 45.4
coord: 1493..1551
e-value: 1.9E-5
score: 24.4
coord: 1285..1354
e-value: 1.7E-13
score: 50.2
coord: 1005..1069
e-value: 6.1E-13
score: 48.4
coord: 1156..1211
e-value: 1.5E-13
score: 50.4
coord: 865..934
e-value: 5.1E-13
score: 48.7
coord: 797..857
e-value: 1.0E-7
score: 31.7
coord: 168..237
e-value: 1.0E-14
score: 54.2
coord: 470..511
e-value: 1.9E-15
score: 56.5
coord: 1212..1275
e-value: 3.7E-13
score: 49.1
coord: 1560..1623
e-value: 5.6E-9
score: 35.7
coord: 378..444
e-value: 1.4E-13
score: 50.5
coord: 1773..1841
e-value: 1.4E-11
score: 44.0
coord: 21..88
e-value: 7.0E-11
score: 41.8
coord: 1851..1915
e-value: 1.7E-10
score: 40.6
coord: 1078..1148
e-value: 4.3E-13
score: 48.9 |
| None | No IPR available | GENE3D | 2.10.50.10 | | coord: 445..469
e-value: 0.27
score: 10.7
coord: 1355..1379
e-value: 0.38
score: 10.3 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 701..761
score: 6.023 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 916..969
score: 7.951 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 1610..1657
score: 6.201 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 844..909
score: 5.985 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 147..212
score: 6.581 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 1057..1122
score: 6.01 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 357..422
score: 6.429 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 1135..1186
score: 6.48 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 1830..1884
score: 7.101 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 1262..1330
score: 6.112 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 1343..1395
score: 6.277 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 985..1033
score: 5.884 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 563..630
score: 6.239 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 435..486
score: 6.683 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 1539..1597
score: 6.378 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 1751..1817
score: 6.353 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 643..696
score: 7.0 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 225..283
score: 7.406 |
| IPR009030 | Growth factor receptor cysteine-rich domain | SUPERFAMILY | 57184 | Growth factor receptor domain | coord: 1284..1424 |
| IPR009030 | Growth factor receptor cysteine-rich domain | SUPERFAMILY | 57184 | Growth factor receptor domain | coord: 986..1048
coord: 1077..1141 |
| IPR009030 | Growth factor receptor cysteine-rich domain | SUPERFAMILY | 57184 | Growth factor receptor domain | coord: 166..284 |
| IPR009030 | Growth factor receptor cysteine-rich domain | SUPERFAMILY | 57184 | Growth factor receptor domain | coord: 841..981 |
| IPR009030 | Growth factor receptor cysteine-rich domain | SUPERFAMILY | 57184 | Growth factor receptor domain | coord: 34..185 |
| IPR009030 | Growth factor receptor cysteine-rich domain | SUPERFAMILY | 57184 | Growth factor receptor domain | coord: 1772..1915 |
| IPR009030 | Growth factor receptor cysteine-rich domain | SUPERFAMILY | 57184 | Growth factor receptor domain | coord: 298..439 |
Blast
The following BLAST results are available for this feature:
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