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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00013484-protein ID=TCONS_00013484-protein|Name=TCONS_00013484-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1206bp
MVEPMFRCSQGYYCPKGSSKNDTQECPAGYYCPTGVGAPVPCPAGSYQDR
TGQYACKLCPPGFFCDPASPLIPVGGPGVVQPANCTAGYYCPQNTSSARE
NPCLPGTYGDVEGLEKARDCKICPGGSYCKGTGETTVSGVCSAGYFCSSQ
ASTPTPQDGTTGDVCPKGSYCPQESQQGEPCPRGSFGNETQLQNASSCTP
CLPGFYCPSTGHVEPFAKCTAGYWCIEGSIETTPDQQAYGVKCPNGSYCP
EGTPYPIQCPKGKYQPLLQKTQPSDCKACDPGQFCGETGLFATSGDCQEG
HYCTLNAEQQNPSDGTTGDVCPIGHYCPKASEAPRPCANGTFMNHTGAAS
CYPCPEGFMCSRQITADPCRQGYYCPVGTGYDIQACPVGTYGAREGLKLE
NECSNCTGGSYCNSPGLPEPTSQCDPGFWCQIGVSMSSPSGIGHTGIGGN
CFRGHECPRGTTYPLACKNGFYAGAEGMEKCLECPEGKYCNGTTINPEPC
PMGHYCPNGTEYSTQYKCPPGTYNNKTEQSSDASCSMCPPSYYCEGYGNI
IPNDLCDAGFFCRGGAESSRPGDIGALEASNSGSPSDTCYKAHDCVCQQQ
NTTKGDICPAGHYCPRGSSEPTACPPGKYCAHAGLENPTRNCSAGYYCSG
SSTIPNQHICPSGSYCPEGTGVPPLCPAGTFANGTGNQESKDCLNCTAGF
FCETEGLSRETGKCSARFYCPPGQSSATPSEYLCLPGHYCPLGSEYPVQC
ENGTYQSSSGQETCLQCPEGFYCDPAEDPSVVNPKLCPEGHYCPPGTSYK
KSFPCPAGYFGPEEGYKNISQCRPCLPGSYCAVPGLKNVTGPCYAGHYCY
GAAKEPSPFEQNPVTGWTFDFHNDLCPKGYFCTNGTSVPEPCPMGRYSGQ
SGLKEESECQLCPPGKFCSVSGAEELKNPPNCSAGYVCLGGAFTGTPADG
TTGYICPKGFYCPEGSNIELSCVPGTYQANQGQGQCTDCDVGKMCPDYNM
TAPIDCKKGYYCPGGVAQSCPPGTFNNRSGLSEEGACSDCTPGMYCPGYG
NQQPFGLCEEGYFCQGGASSKVPNASNPRYPLNGPCPTGHYCPDGTPTPV
GCPRGRFRNITGARNSLDCFECTPGSYCETPGLTSPTDLCLEGWYCPSNH
LTKVPTPENFTCFAGHYCPNGTAWPIECDTGKVLTNQVAVGLHVETVQQV
TIVQAK Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005576 | extracellular region |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006030 | chitin metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008061 | chitin binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006030 |
chitin metabolic process |
| cellular_component |
GO:0005576 |
extracellular region |
| molecular_function |
GO:0008061 |
chitin binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR011641 | Tyrosine-protein kinase ephrin type A/B receptor-like | SMART | SM01411 | GCC2_GCC3_2 | coord: 88..141
e-value: 0.007
score: 25.6
coord: 454..500
e-value: 1.6E-7
score: 41.0
coord: 790..843
e-value: 0.45
score: 19.6
coord: 168..219
e-value: 0.0072
score: 25.5
coord: 1089..1139
e-value: 2.0E-6
score: 37.3
coord: 372..424
e-value: 3.9
score: 11.7
coord: 611..657
e-value: 0.72
score: 18.3
coord: 1009..1053
e-value: 4.6
score: 11.0
coord: 663..714
e-value: 7.9E-4
score: 28.7
coord: 324..369
e-value: 6.5E-6
score: 35.7
coord: 737..787
e-value: 4.6E-9
score: 46.1
coord: 29..71
e-value: 9.5E-8
score: 41.7
coord: 879..932
e-value: 6.2E-4
score: 29.1
coord: 959..1006
e-value: 1.9E-5
score: 34.1
coord: 503..555
e-value: 0.012
score: 24.8
coord: 246..297
e-value: 4.6E-4
score: 29.5 |
| None | No IPR available | GENE3D | 2.10.50.10 | | coord: 871..915
e-value: 4.2E-10
score: 39.1 |
| None | No IPR available | GENE3D | 2.10.50.10 | | coord: 916..952
e-value: 0.28
score: 10.7 |
| None | No IPR available | GENE3D | 2.10.50.10 | | coord: 376..441
e-value: 7.7E-11
score: 41.7
coord: 240..321
e-value: 2.1E-12
score: 46.8
coord: 507..594
e-value: 3.7E-14
score: 52.4
coord: 794..865
e-value: 2.0E-12
score: 46.8
coord: 1169..1195
e-value: 0.15
score: 12.0
coord: 1012..1079
e-value: 3.0E-12
score: 46.2 |
| None | No IPR available | GENE3D | 2.10.50.10 | | coord: 595..657
e-value: 5.0E-9
score: 35.9
coord: 94..156
e-value: 2.6E-12
score: 46.4
coord: 956..1011
e-value: 4.6E-15
score: 55.2
coord: 1086..1149
e-value: 4.0E-15
score: 55.4
coord: 660..730
e-value: 8.0E-14
score: 51.3
coord: 1150..1168
e-value: 0.051
score: 13.4
coord: 165..234
e-value: 1.7E-13
score: 50.2
coord: 734..793
e-value: 2.9E-16
score: 59.1
coord: 322..375
e-value: 7.5E-15
score: 54.5
coord: 26..93
e-value: 2.3E-17
score: 62.6
coord: 451..506
e-value: 4.8E-13
score: 48.8 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 1143..1181
score: 6.01 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 357..414
score: 5.998 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 915..988
score: 6.835 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 770..833
score: 6.67 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 62..131
score: 6.848 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 222..287
score: 6.607 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 11..56
score: 7.406 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 1061..1130
score: 6.898 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 992..1048
score: 6.429 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 300..351
score: 5.858 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 717..764
score: 7.33 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 645..693
score: 6.733 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 487..546
score: 7.076 |
| IPR009030 | Growth factor receptor cysteine-rich domain | SUPERFAMILY | 57184 | Growth factor receptor domain | coord: 657..797 |
| IPR009030 | Growth factor receptor cysteine-rich domain | SUPERFAMILY | 57184 | Growth factor receptor domain | coord: 929..1068 |
| IPR009030 | Growth factor receptor cysteine-rich domain | SUPERFAMILY | 57184 | Growth factor receptor domain | coord: 786..830
coord: 874..940 |
| IPR009030 | Growth factor receptor cysteine-rich domain | SUPERFAMILY | 57184 | Growth factor receptor domain | coord: 8..150 |
Blast
The following BLAST results are available for this feature:
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