TCONS_00013280-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00013280-protein
Unique NameTCONS_00013280-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length444

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00013280-protein ID=TCONS_00013280-protein|Name=TCONS_00013280-protein|organism=Clytia hemisphaerica|type=polypeptide|length=444bp
MAYQEFMYDEAFNFKSDQDIHQLKQQAHYEEYHQIGDSDQRLPPLGACSN
EVISETPQPPPESLDIGKFLNLQDQYEQLNSSLFALTSHFAQVQFRLKQI
INGPKDNHEKLMEELEEFAFAGCPDVSAPEEGKSCTSCTSHQAIKHYKER
ILEEEHRERRLDHHLKEMIANLEVCQKQTEERKDSPMKVSKQKGYHRLSN
QLERSTKLDISDDEEVEDDEYYDATDGKTDDIKKYIDKTMAKLINPRQAK
QSIISQVNKQIQDMEKFVNFLSIYDSSTEAETDTPSPSHSSRSISSSKNT
SSSSGKPANTQCSADGIPAPHTLRTSDEKRKRIHEASVSIMKKGLALLQI
FAISQFGCSAKHFQEHMMRKRETATVSSTGHLKPLGQMKGSIDHIIAVHA
KLVEVGGLHXNCLPRVNYKCLNKIRAMVIFENPAFCVNKFSHSF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007419XLOC_007419Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00013280TCONS_00013280Clytia hemisphaericatranscript
Blast
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BLAST of TCONS_00013280-protein vs. Swiss-Prot (Human)
Match: RUND1 (RUN domain-containing protein 1 OS=Homo sapiens GN=RUNDC1 PE=1 SV=3)

HSP 1 Score: 130.954 bits (328), Expect = 6.789e-33
Identity = 87/306 (28.43%), Postives = 153/306 (50.00%), Query Frame = 0 
Query:   80 NSSLFALTSHFAQVQFRLKQIINGPKDNHEKLMEELEEFAFAGCPDV--------SAPEEGKSCTSCTSH-----QAIKHYKERILEEEHRERRLDHHLKEMIANLEVCQKQTEERKDSPMKVSKQKGYHRLSNQLERSTKLDISDDEEVEDDEYYDATDGKTDDIKKYIDKTMAKLINPRQAKQSIISQVNKQIQDMEKFVNFLSIYDSSTEAETDTPSPSHSSRSISSSKNTSSSSGKPANTQCSADGI--PAPHTLRTSDEKRKRIHEASVSIMKKGLALLQIFAISQFGCSAKHFQEHMMRK 370
            +S+L AL+SHFAQVQFRL+Q++ G     ++L+ ELE+FAF GCP V         A +EG              Q+ +  +ER+  +  +++ L   LK  + +LE    Q       P  V  ++    +   ++   KLD++ +E        D +   T+++++ +D  +A+++NP + K+ ++ Q+  QI+D+E F+NF+         + +  SP  +       K    + GK  N  CS  G     P   +T  E  K++ E  + +M++ LA+LQIFA+SQFGC+       + ++
Sbjct:   91 DSALLALSSHFAQVQFRLRQVVRGAPAEQQRLLRELEDFAFRGCPHVLGYEGPGDPASDEGDGLPGDRPWLRGEDQSEQEKQERLETQREKQKELILQLKTQLDDLETFAYQEGSYDSLPQSVVLERQRVIIDELIK---KLDMNLNE--------DISSLSTEELRQRVDAAVAQIVNPARVKEQLVEQLKTQIRDLEMFINFI---------QDEVGSPLQTGGGHCECK----AGGKTGNG-CSRTGSSRTPPGNSKTKAEDVKKVRETGLHLMRRALAVLQIFAVSQFGCATGQIPPTLWQR 371
The following BLAST results are available for this feature:
BLAST of TCONS_00013280-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RUND16.789e-3328.43RUN domain-containing protein 1 OS=Homo sapiens GN... [more]
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