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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00013275-protein ID=TCONS_00013275-protein|Name=TCONS_00013275-protein|organism=Clytia hemisphaerica|type=polypeptide|length=392bp
GRQATTDSLVRKTTTTTRSSDQTTSGDIGTTNRTTSGDMMTNRTTEGTLG
NTTDEMGGSGNTTDETGGSGNTTDATGGSGNTTDATGGSGNTTDDMGGNG
GTTDATGGSGNTTDATGGSGNTTDDMGGNGGTTDATGGSGNTTDATGGSG
NTTDDMGGNGGTTDDTGGIGDITPIDDRTENEILADRFCEFRDEGLFAYT
VNCQAYVECVGEETRRRAIFKACDRGQHFHPDILNCVPANQFTCFNALQK
NPPEDPYLPPGVSPFPRPEVCNATFNDGNIADPESCSRYYTCTSGLTIGP
RPCSTSLYFNPRIGNCDWPKNGNTENCRGATIRTTTTTTRRTTMKDDSTT
MKLNTTTTTRRTTTTTRRTTLQTRETTTSTKAKTVPTDIIFA Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR002557 | Chitin-bd_dom |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005576 | extracellular region |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006030 | chitin metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008061 | chitin binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006030 |
chitin metabolic process |
| cellular_component |
GO:0005576 |
extracellular region |
| molecular_function |
GO:0008061 |
chitin binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR002557 | Chitin binding domain | SMART | SM00494 | chi_10 | coord: 269..329
e-value: 8.4E-10
score: 48.6
coord: 187..246
e-value: 8.6E-7
score: 38.6 |
| IPR002557 | Chitin binding domain | PFAM | PF01607 | CBM_14 | coord: 271..327
e-value: 6.2E-11
score: 42.2
coord: 189..244
e-value: 2.5E-5
score: 24.3 |
| IPR002557 | Chitin binding domain | GENE3D | 2.170.140.10 | | coord: 180..255
e-value: 5.3E-8
score: 32.1
coord: 263..340
e-value: 2.0E-12
score: 46.3 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 186..246
score: 10.551 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 268..329
score: 12.797 |
| IPR002557 | Chitin binding domain | SUPERFAMILY | 57625 | Invertebrate chitin-binding proteins | coord: 265..338 |
| IPR002557 | Chitin binding domain | SUPERFAMILY | 57625 | Invertebrate chitin-binding proteins | coord: 186..246 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..175 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 357..387 |
Blast
The following BLAST results are available for this feature:
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