TCONS_00013225-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00013225-protein
Unique NameTCONS_00013225-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1312

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00013225-protein ID=TCONS_00013225-protein|Name=TCONS_00013225-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1312bp
ELMLLDAKLKGLAAPSNLSMNQTLEGHSDTVKVITWNEKHHKLTTSDQKG
LIIVWILYKGAWYEEMINDRNKSVVCDMKWNTEGQKICIAYEDGAIIMGS
VDGNRIWGKELKGIKLSKVEWSPDSKIILFGTNTGEVHIYDNIGNSIGAV
SLPCLEGEVSGYNLVSVEWYNGKSGYLEENCPQLAIAYDIGRCQIMRHEF
DDEPVLLNITMTIVSLKWSCKGDVLAIAGSQKTSSQDRDVNIVQFYNPFG
QHLRTLXCIAYEDGAIIMGSVDWNRIWGKELKGIKLSKVEWSPDSKIILF
GTNTGEVHIYDNIGNSIGAVSLPCLEGEVSGYNLVSVEWYNGKSGYLEEN
CPQLAIAYDIGRCQIMRHEFDDEPVLLNITMTIVSLKWSCKGDVLAIAGS
QKTSSQDRDVNIVQFYNPFGQHLRTLKVPGKEMKAVSWEGSSLRISLAVD
SFIYFANIRPDYKWGYFANTLVYAFTKPERSEWVVIFWDTKSNERYVKYV
RNLISITAAAEHCVLVTRADDANMQHVLVLCNAIGTPLDSRYIGIEPCFM
AMTAGYVVAASREAFYTWNYKSTRKFNTSELTQTITRKRDGTEKLFHADD
VPSGAGEGIQDIKKALASTSDPVCAVCVSEKLVVLGRESGTIQCYSLPRL
GLENKYVLNCRPYQFTMNSNSTKLAIIDISGILTFFDFEAKTTNIQTGRE
QYGEHLKFERKDAWDMKWADDNPDLFAMTEKTRMYIFRNLEPEEPIVCSG
YICQFNDLQIQSILLDEIMKDPENPTKESIIDIETKSLRDTRDLLDKVGI
DDTYQFVMDNPHPRLWRLLAESALEKLDLEVAEKAFVKCQDYQGIKFVKK
LNKLDVEAIRSAEVCAYFQRYDEAEKTYLDADRWDLAVEMRMKLGDWFRV
VQLVKWGGGGDDALLEKAWNAIGDYYCDHQKWANAVQYYVEGRNEERISE
CYYMLEDYKGLEKFSEQLPENHKLLKSIGQMFAGVGLCEQAVSAFTKTGE
VKLAIDTCVTLNQWDLAVKLAKQHKHQEINSLLAKYASHLLEKDKKLEAI
ELYRKASHFIDAAKLIFQLASDIAKTRAHPMRAKKMYVLGGIMIENYHEM
MKENATANKNKNKSGGGTNTSTLAGLLQEDYTSSGDSYFIDNAWRGAEAF
HFYLLAQRQLYEGRPDAALRTAMQLKDYDDIIDPIDAYSLIALTACSNKA
FGVCSKAFIRLENIETLSEDERKRYEELALSIFTRYGAKDGAAPTVECTS
CGSHIPEWSTACPSCDSKFSACIVSGRPLMEYQFWMCRLCKHRAHEEEIS
SYSACPLCHTAL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007394XLOC_007394Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00013225TCONS_00013225Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR017233WDR35
IPR015943WD40/YVTN_repeat-like_dom
IPR024977Apc4_WD40_dom
IPR011990TPR-like_helical_dom
IPR017986WD40_repeat_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 104..141
e-value: 42.0
score: 6.7
coord: 274..311
e-value: 42.0
score: 6.7
coord: 609..646
e-value: 330.0
score: 1.1
coord: 17..56
e-value: 1.4
score: 16.0
coord: 61..100
e-value: 270.0
score: 1.6
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 24..55
score: 9.673
IPR017233WD repeat protein 35PIRSFPIRSF037536WD35coord: 256..1312
e-value: 0.0
score: 1379.1
coord: 4..257
e-value: 5.6E-103
score: 343.3
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 339..741
e-value: 5.6E-18
score: 64.5
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 11..338
e-value: 6.6E-24
score: 83.9
IPR024977Anaphase-promoting complex subunit 4, WD40 domainPFAMPF12894ANAPC4_WD40coord: 256..312
e-value: 2.9E-5
score: 24.2
coord: 78..142
e-value: 2.3E-5
score: 24.5
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 804..963
e-value: 2.6E-5
score: 23.0
coord: 964..1239
e-value: 9.6E-8
score: 31.0
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 24..65
score: 8.756
IPR017986WD40-repeat-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 17..145
coord: 277..312
NoneNo IPR availableSUPERFAMILY69322Tricorn protease domain 2coord: 73..142
coord: 199..343
coord: 632..739

Blast
[Close]
BLAST of TCONS_00013225-protein vs. Swiss-Prot (Human)
Match: WDR35 (WD repeat-containing protein 35 OS=Homo sapiens GN=WDR35 PE=1 SV=3)

HSP 1 Score: 1350.5 bits (3494), Expect = 0.000e+0
Identity = 633/1079 (58.67%), Postives = 821/1079 (76.09%), Query Frame = 0 
Query:  246 YNPFGQHLRTLXCIAYEDGAIIMGSVDWNRIWGKELKGIKLSKVEWSPDSKIILFGTNTGEVHIYDNIGNSIGAVSLPCLEGEVSGYNLVSVEWYNGKSGYLEENCPQLAIAYDIGRCQIMRHEFDDEPVLLNITMTIVSLKWSCKGDVLAIAGSQKTSSQDRDVNIVQFYNPFGQHLRTLKVPGKEMKAVSWEGSSLRISLAVDSFIYFANIRPDYKWGYFANTLVYAFTKPERSEWVVIFWDTKSNERYVKYVRNLISITAAAEHCVLVTRADDANMQH-----------VLVLCNAIGTPLDSRYIGIEPCFMAMTAGYVVAASREAFYTWNYKSTRKFNTSELTQTITRKRDGTEKLFHADDVPSGAGEGIQDIKKALASTSDPVCAVCVSEKLVVLGRESGTIQCYSLPRLGLENKYVLNCRPYQFTMNSNSTKLAIIDISGILTFFDFEAKTTNIQTGREQYGEHLKFERKDAWDMKWADDNPDLFAMTEKTRMYIFRNLEPEEPIVCSGYICQFNDLQIQSILLDEIMKDPENPTKESIIDIETKSLRDTRDLLDKVGIDDTYQFVMDNPHPRLWRLLAESALEKLDLEVAEKAFVKCQDYQGIKFVKKLNKLDVEAIRSAEVCAYFQRYDEAEKTYLDADRWDLAVEMRMKLGDWFRVVQLVKWGGG-GDDALLEKAWNAIGDYYCDHQKWANAVQYYVEGRNEERISECYYMLEDYKGLEKFSEQLPENHKLLKSIGQMFAGVGLCEQAVSAFTKTGEVKLAIDTCVTLNQWDLAVKLAKQHKHQEINSLLAKYASHLLEKDKKLEAIELYRKASHFIDAAKLIFQLASDIAKTRAHPMRAKKMYVLGGIMIENYHEMMKENATANKNKNKSGGGTNTSTLAGLLQEDYTSSGDSYFIDNAWRGAEAFHFYLLAQRQLYEGRPDAALRTAMQLKDYDDIIDPIDAYSLIALTACSNKAFGVCSKAFIRLENIETLSEDERKRYEELALSIFTRYGAKDGAAPTVECTSCGSHIPEWSTACPSCDSKFSACIVSGRPLMEYQFWMCRLCKHRAHEEEISSYSACPLCHTAL 1312
            +N  GQ +    CI YEDGA+I+GSVD NRIWGK+LKGI+LS V WS DSK++LFG   GE+HIYDN GN +  + L CL       ++  + WY+G  GY+E +CP LA+ +D GRCQIMRHE D  PVL++  M +V ++W+  G VLA+AG QK + QD+DVNIVQFY PFG+HL TLKVPGKE+ A+SWEG  L+I+LAVDSFIYFANIRP+YKWGY +NT+VYA+T+P+R E+ V+FWDTK+NE+YVKYV+ LISIT   + C+L T+AD+ + Q            VLVLCN+IGTPLD +YI I P F+AMT  +V+AAS+EAFYTW Y+  +K    E+ Q    +++G E+++H DD PSG+ +G+ D  K +  T DP+CA+  S+K++++GRESGTIQ YSLP +GL  KY LNCR YQ ++N NS++LAIIDISG+LTFFD +A+ T+  TG++  GE LK ER+D WDMKWA DNPDLFAM EKTRMY+FRNL+PEEPI  SGYIC F DL+I+S+LLDEI+KDPE+P K+ +I+ E +SLRD+R L++KVGI D  QF+ DNPHPRLWRLLAE+AL+KLDL  AE+AFV+C+DYQGIKFVK+L KL  E+++ AEV  YF R++EAE+TYL+ DR DLA+ +R+KLGDWFRV+QL+K G G  DD+LLE+A NAIGDY+ D QKW NAVQYYV+GRN+ER++ECYYMLEDY+GLE  +  LPENHKLL  I QMF  VG+CEQAV+AF K  + K A+DTCV LNQW+ AV+LAK H  +EI SLLA+YASHLLEK+K L+AIELYRKA++F DAAKL+F++A + AK  + P+R KK+YVL  ++IE YHE MK NA   K K KS     TS LAGLL+E+  S+ D  F DNAWRGAEA+HF++LAQRQLYEG  D AL+TA+ LKDY+DII P++ YSL+AL AC+++AFG CSKAFI+L+++ETLS +++++YE+LAL IFT++ +KD   P ++    G             + K   C+ +G P+ EYQFWMC +CKH    +EIS YS CPLCH+ +
Sbjct:  123 WNADGQKI----CIVYEDGAVIVGSVDGNRIWGKDLKGIQLSHVTWSADSKVLLFGMANGEIHIYDNQGNFMIKMKLSCLVNVTGAISIAGIHWYHGTEGYVEPDCPCLAVCFDNGRCQIMRHENDQNPVLIDTGMYVVGIQWNHMGSVLAVAGFQKAAMQDKDVNIVQFYTPFGEHLGTLKVPGKEISALSWEGGGLKIALAVDSFIYFANIRPNYKWGYCSNTVVYAYTRPDRPEYCVVFWDTKNNEKYVKYVKGLISITTCGDFCILATKADENHPQEENEMETFGATFVLVLCNSIGTPLDPKYIDIVPLFVAMTKTHVIAASKEAFYTWQYRVAKKLTALEINQITRSRKEGRERIYHVDDTPSGSMDGVLDYSKTIQGTRDPICAITASDKILIVGRESGTIQRYSLPNVGLIQKYSLNCRAYQLSLNCNSSRLAIIDISGVLTFFDLDARVTD-STGQQVVGELLKLERRDVWDMKWAKDNPDLFAMMEKTRMYVFRNLDPEEPIQTSGYICNFEDLEIKSVLLDEILKDPEHPNKDYLINFEIRSLRDSRALIEKVGIKDASQFIEDNPHPRLWRLLAEAALQKLDLYTAEQAFVRCKDYQGIKFVKRLGKLLSESMKQAEVVGYFGRFEEAERTYLEMDRRDLAIGLRLKLGDWFRVLQLLKTGSGDADDSLLEQANNAIGDYFADRQKWLNAVQYYVQGRNQERLAECYYMLEDYEGLENLAISLPENHKLLPEIAQMFVRVGMCEQAVTAFLKCSQPKAAVDTCVHLNQWNKAVELAKNHSMKEIGSLLARYASHLLEKNKTLDAIELYRKANYFFDAAKLMFKIADEEAKKGSKPLRVKKLYVLSALLIEQYHEQMK-NAQRGKVKGKSSEA--TSALAGLLEEEVLSTTDR-FTDNAWRGAEAYHFFILAQRQLYEGCVDTALKTALHLKDYEDIIPPVEIYSLLALCACASRAFGTCSKAFIKLKSLETLSSEQKQQYEDLALEIFTKHTSKDNRKPELDSLMEGG------------EGKLPTCVATGSPITEYQFWMCSVCKHGVLAQEISHYSFCPLCHSPV 1180

HSP 2 Score: 357.451 bits (916), Expect = 7.466e-104
Identity = 163/261 (62.45%), Postives = 202/261 (77.39%), Query Frame = 0 
Query:    6 DAKLKGLAAPSNLSMNQTLEGHSDTVKVITWNEKHHKLTTSDQKGLIIVWILYKGAWYEEMINDRNKSVVCDMKWNTEGQKICIAYEDGAIIMGSVDGNRIWGKELKGIKLSKVEWSPDSKIILFGTNTGEVHIYDNIGNSIGAVSLPCLEGEVSGYNLVSVEWYNGKSGYLEENCPQLAIAYDIGRCQIMRHEFDDEPVLLNITMTIVSLKWSCKGDVLAIAGSQKTSSQDRDVNIVQFYNPFGQHLRTLXCIAYEDGAI 266
            DAKL+GLAAPSNLSMNQTLEGHS +V+V+TWNE++ KLTTSD+ GLIIVW+LYKG+W EEMIN+RNKSVV  M WN +GQKICI YEDGA+I+GSVDGNRIWGK+LKGI+LS V WS DSK++LFG   GE+HIYDN GN +  + L CL       ++  + WY+G  GY+E +CP LA+ +D GRCQIMRHE D  PVL++  M +V ++W+  G VLA+AG QK + QD+DVNIVQFY PFG+HL TL     E  A+
Sbjct:   49 DAKLRGLAAPSNLSMNQTLEGHSGSVQVVTWNEQYQKLTTSDENGLIIVWMLYKGSWIEEMINNRNKSVVRSMSWNADGQKICIVYEDGAVIVGSVDGNRIWGKDLKGIQLSHVTWSADSKVLLFGMANGEIHIYDNQGNFMIKMKLSCLVNVTGAISIAGIHWYHGTEGYVEPDCPCLAVCFDNGRCQIMRHENDQNPVLIDTGMYVVGIQWNHMGSVLAVAGFQKAAMQDKDVNIVQFYTPFGEHLGTLKVPGKEISAL 309
The following BLAST results are available for this feature:
BLAST of TCONS_00013225-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
WDR357.466e-10458.67WD repeat-containing protein 35 OS=Homo sapiens GN... [more]
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