TCONS_00013184-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00013184-protein
Unique Name	TCONS_00013184-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	495

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00013184-protein ID=TCONS_00013184-protein|Name=TCONS_00013184-protein|organism=Clytia hemisphaerica|type=polypeptide|length=495bp
FSSRFSEKTKKINKKRITNEMDSDDSEEPLHNVVEGEDAEPLGEKPMKLK
VYKQRWFILFIFSCVSFANGVLYTCIVSINDIIARYYRVKEDRVDWAGNI
FPFMYIFMALPSAYMMTSLGLRTLVIIGSSLNAIGTCLHFAGVFGNGYRF
IMGGQVAAALSFPTILQVPVRLSTVWFPEYEHAKATSIAMVANVFGLGIG
FLQPSYMVPDVESKEDIYAGLYDLYLTHLIFLIVCLGLVYSFFKEKPPLP
PSFAAAVSKFRTEDDDSVEKEGESPTMIQSIKVLTVNKNFLILTQAYALY
FGLYLFYVTCLNDMVSHLVEEIYIGWMGFSADVAAIIGILVCSVIIDKFQ
AYQICSLVLTFGVLVSWTLFALSVVRWKSTIALFVTYAMVSLFGAPFFVV
GIEYTAEVTYPISEGLSSAIILLLGNLYGFLMVLFFGSWIEKGHLGFATY
FVIGVYAVCFILVCFIRQTLNRHDAERHHKRPQTTNGEENDPLLI

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_007365	XLOC_007365	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00013184	TCONS_00013184	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011701	MFS
IPR020846	MFS_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1250.20		coord: 278..483 e-value: 2.7E-16 score: 58.9 coord: 43..252 e-value: 1.0E-17 score: 63.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 476..495
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
IPR011701	Major facilitator superfamily	PFAM	PF07690	MFS_1	coord: 63..399 e-value: 2.1E-18 score: 66.3
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 59..467 e-value: 1.93917E-18 score: 84.2877
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 38..476

Blast

[Close]

BLAST of TCONS_00013184-protein vs. Swiss-Prot (Human)
Match: FLVC2 (Feline leukemia virus subgroup C receptor-related protein 2 OS=Homo sapiens GN=FLVCR2 PE=1 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 4.571e-53
Identity = 129/455 (28.35%), Postives = 221/455 (48.57%), Query Frame = 0

Query:   39 AEPLGEKPMKL---KVYKQRWFILFIFSCVSFANGVLYTCIVSINDIIARYYRVKEDRVDWAGNIFPFMYIFMALPSAYMMTSLGLRTLVIIGSSLNAIGTCLHFAGVFGNGYRFIMGGQVAAALSFPTILQVPVRLSTVWFPEYEHAKATSIAMVANVFGLGIGFLQPSYMVPDVESKEDIYAGLYDLYLTHLIFLIV------CLGLVYSFFKEKPPLPPSFAAAVSKFRTEDDDSVEKEGESPTMIQSIKVLTVNKNFLILTQAYALYFGLYLFYVTCLNDMV--SHLVEEIYIGWMGFSADVAAIIGILVCSVIIDKFQAYQICSLVLTFGVLVSWTLFALSVVRWKSTIALFVTYAMVSLFGAPFFVVGIEYTAEVTYPISEGLSSAIILLLGNLYGFLMVLFFGSWIEK-----GHLGFATYFVIGVYAVCFILVCFIRQTLNRHDAER 477
            A P    P  L   KV ++RW ++ +FSC S  N   +    SIN+I   +Y V    +DW    +   YI + LP A+++   GLRT+ + GS+LN +G  +    +  + +   + GQ+  +++   IL +P R+++VWF   E + A S+A+  N  G+ IGFL P  +VP++E ++++       Y   ++F I+       L LV   FKEKP  PPS A ++S   T  D S          + SI  L  N NF++L   Y L  G +    T LN MV   +  EE+  G +G +  +A ++G ++  + +D+ + Y+  +LV+    LV   ++  + +       +F+T   +  F   +  +G E+  E+TYP SEG+SS ++ +   ++G +  +  G  I+      G++    +  +G     FI     RQ  N+   E 
Sbjct:   65 AHPSSSGPEDLSVIKVSRRRWAVVLVFSCYSMCNSFQWIQYGSINNIFMHFYGVSAFAIDWLSMCYMLTYIPLLLPVAWLLEKFGLRTIALTGSALNCLGAWVKLGSLKPHLFPVTVVGQLICSVAQVFILGMPSRIASVWFGANEVSTACSVAVFGNQLGIAIGFLVPPVLVPNIEDRDEL------AYHISIMFYIIGGVATLLLILVIIVFKEKPKYPPSRAQSLSYALTSPDAS---------YLGSIARLFKNLNFVLLVITYGLNAGAFYALSTLLNRMVIWHYPGEEVNAGRIGLTIVIAGMLGAVISGIWLDRSKTYKETTLVVYIMTLVGMVVYTFT-LNLGHLWVVFITAGTMGFFMTGYLPLGFEFAVELTYPESEGISSGLLNISAQVFGIIFTISQGQIIDNYGTKPGNIFLCVFLTLGAALTAFIKADLRRQKANKETLEN 503

The following BLAST results are available for this feature:

BLAST of TCONS_00013184-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00013184-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
FLVC2	4.571e-53	28.35	Feline leukemia virus subgroup C receptor-related ...	[more]

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TCONS_00013184-protein (polypeptide) - C. hemisphaerica