TCONS_00013165-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00013165-protein
Unique NameTCONS_00013165-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length361

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00013165-protein ID=TCONS_00013165-protein|Name=TCONS_00013165-protein|organism=Clytia hemisphaerica|type=polypeptide|length=361bp
MRSLIFGNCLNQLKQEQLRRCIYGCAKGVSIARERRNFSTSTKKQQKILI
TGSLGQLGFGIAKELRRKYGDENIVMSDVVKAPSDISNSGPFLYADILDY
KNLQSIVVNYNIDTIVHLSALLSAIGEHNVSEALKINIYGFHNIIELCRR
YGLKLFCPSTIGAFGPDSPRNPTPDLTIQRPRTIYGVSKVHMELMGEYYH
HRYGLDFRSLRYPGVISAFTQPGGGTTDYAVDIFHCALKTGKFECNLTEN
TRLPMMYIDDVIKATANMIDTPEEELKIRTYNISAMSFTPKEISEEVKKI
MPEFEISYDVDSVRQKIAESWPQVFDDQNARKDWGWQHDFDLTKMCKEMF
RLLGPGYGKDI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007349XLOC_007349Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00013165TCONS_00013165Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001509Epimerase_deHydtase
IPR016040NAD(P)-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0050662coenzyme binding
GO:0003824catalytic activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003824 catalytic activity
molecular_function GO:0050662 coenzyme binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.720coord: 42..353
e-value: 8.7E-35
score: 119.9
NoneNo IPR availableCDDcd05272TDH_SDR_ecoord: 47..353
e-value: 0.0
score: 527.265
IPR001509NAD-dependent epimerase/dehydratasePFAMPF01370Epimerasecoord: 48..283
e-value: 1.4E-26
score: 93.3
IPR016040NAD(P)-binding domainSUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 42..351

Blast
[Close]
BLAST of TCONS_00013165-protein vs. Swiss-Prot (Human)
Match: TDH (Inactive L-threonine 3-dehydrogenase, mitochondrial OS=Homo sapiens GN=TDH PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.670e-66
Identity = 99/172 (57.56%), Postives = 128/172 (74.42%), Query Frame = 0 
Query:   39 STSTKKQQKILITGSLGQLGFGIAKELRRKYGDENIVMSDVVKAPSDISNSGPFLYADILDYKNLQSIVVNYNIDTIVHLSALLSAIGEHNVSEALKINIYGFHNIIELCRRYGLKLFCPSTIGAFGPDSPRNPTPDLTIQRPRTIYGVSKVHMELMGEYYHHRYGLDFRSL 210
            S S     ++LITG+LGQLG G+A  LR+++G +++++SD+ K P  + +SGPF+Y+DILDYKNL+ IVVN  I  + H SALLSA GE NVS A  +NI G HNI+++   + L+LF PSTIGAFGP SPRNPTPDL IQRPRTIYGVSKVH ELMGE    R+ +  +S+
Sbjct:   45 SFSDTDHPRVLITGALGQLGVGLANLLRKRFGKDSVILSDIRKPPDHVFHSGPFIYSDILDYKNLREIVVNNRITWLFHYSALLSAFGEANVSLARAVNITGLHNILDVAAEHNLQLFVPSTIGAFGPTSPRNPTPDLCIQRPRTIYGVSKVHAELMGETMQSRFSMMPQSM 216
The following BLAST results are available for this feature:
BLAST of TCONS_00013165-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TDH1.670e-6657.56Inactive L-threonine 3-dehydrogenase, mitochondria... [more]
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