TCONS_00013131-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00013131-protein
Unique NameTCONS_00013131-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length576

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00013131-protein ID=TCONS_00013131-protein|Name=TCONS_00013131-protein|organism=Clytia hemisphaerica|type=polypeptide|length=576bp
MRRILSEESNDKNNANITNQKVVYPSLPNGDSKTTLTPSTNTDHKETPEK
AVTPNKPIEPNKPLVNLEQDNDKKEPPKPVVNKAIEETKNSIKKDDFAEP
NISHDKETLITPNKKAGKLDTTPGLPNGWVKKVDQNSGKVYYIDHNTKTT
HWVPPDLQSNNASNNLVNKQLNMKTLDPTNQNLKDSSNIPKATSNITPTT
IATPKAAQNALSKPPTPQNQASTQPKKTTPKPDQSNMIPQTAQKPQVQPQ
QPPQNTPHQPIQKQPSQLIPPQPSSNITQQPKSTINTSQLPVTPQQPTKP
ILKQHPPPPVNXPVTLQQPTKPILKQHPPPPVNQAATPQNPMKPKPPSLT
QPPKVTQSPSTPINVPQAPKNTVPATSRYTTDSLDLPKQPSLKRSLSSPN
LAENLANLNKNKPKTPIVDRGSKPSIPSSNTKPTHLIDRASKPISASRLR
NLSPVYGSQGMSLTGLKNLGNTCYMNSVLQCLVNTPPLVRYFSSGLYEKD
LNAEKINTNPLKGVIAREFAFIMKVLVSGTYRSVSPIDFKLALGGISRRF
LTYEQQDSHEVLLIVLDGLHNDVNKV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007336XLOC_007336Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00013131TCONS_00013131Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR001394Peptidase_C19_UCH
IPR018200USP_CS
IPR028889USP_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0036459thiol-dependent ubiquitinyl hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0016579protein deubiquitination
GO:0006511ubiquitin-dependent protein catabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016579 protein deubiquitination
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
molecular_function GO:0005515 protein binding
molecular_function GO:0036459 thiol-dependent ubiquitinyl hydrolase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 124..157
e-value: 8.0E-12
score: 55.3
IPR001202WW domainPFAMPF00397WWcoord: 125..155
e-value: 1.2E-12
score: 47.6
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 123..157
score: 15.466
IPR001202WW domainSUPERFAMILY51045WW domaincoord: 119..157
NoneNo IPR availableGENE3D3.90.70.10coord: 457..576
e-value: 4.7E-31
score: 107.1
NoneNo IPR availableGENE3D2.20.70.10coord: 139..163
e-value: 5.2E-9
score: 35.1
NoneNo IPR availableGENE3D2.20.70.10coord: 38..138
e-value: 4.4E-11
score: 42.0
NoneNo IPR availableCDDcd00201WWcoord: 126..157
e-value: 2.23276E-8
score: 49.8338
NoneNo IPR availableSUPERFAMILY54001Cysteine proteinasescoord: 463..574
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 464..575
e-value: 3.2E-27
score: 95.6
IPR018200Ubiquitin specific protease, conserved sitePROSITEPS00972USP_1coord: 465..480
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 464..576
score: 19.861

Blast
[Close]
BLAST of TCONS_00013131-protein vs. Swiss-Prot (Human)
Match: UBP8 (Ubiquitin carboxyl-terminal hydrolase 8 OS=Homo sapiens GN=USP8 PE=1 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 1.760e-48
Identity = 93/191 (48.69%), Postives = 125/191 (65.45%), Query Frame = 0 
Query:  388 KQPS-LKRSLSSPNLAENLANLNKNKPK-TPIVDRGSKPSIPSSNTKPTHLIDRASKPISASRLRNLSPVYGSQGMSLTGLKNLGNTCYMNSVLQCLVNTPPLVRYFSSGLYEKDLNAEKINTNPLKGVIAREFAFIMKVLVSGTYRSVSPIDFKLALGGISRRFLTYEQQDSHEVLLIVLDGLHNDVNKV 576
            ++PS LKRS SSP++ + +    K KP  TP V+R +KP+       P   I R    +SAS++RNL+PV+G  G +LTGL+NLGNTCYMNS+LQCL N P L  YF+   Y+ D+N  + N    KG +A EF  IMK L +G YR +SP DFK+ +G I+ +F  Y QQDS E+LL ++DGLH D+NK 
Sbjct:  708 REPSKLKRSYSSPDITQAIQEEEKRKPTVTPTVNRENKPTCY-----PKAEISR----LSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDIN--RSNLLGHKGEVAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKA 887
The following BLAST results are available for this feature:
BLAST of TCONS_00013131-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UBP81.760e-4848.69Ubiquitin carboxyl-terminal hydrolase 8 OS=Homo sa... [more]
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