TCONS_00013079-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00013079-protein
Unique NameTCONS_00013079-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1032

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00013079-protein ID=TCONS_00013079-protein|Name=TCONS_00013079-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1032bp
MSANSKPPESFDMLPDLESMRKGPSSTLHSDIHEQPHSTMVGDKVLTAKE
NMVYRTVMEVVNQKEALRKSLQENYEQLLVRVEQVKKFKEMKEETEKHLR
DELKKEKEKNNILVSKHKKSQETKSLESLKLKNLKHEVIDKLDSLSGKLK
SIPPHSLEDEDGKKLCEVMNDLTIKDGNSEYVIATGFNESPDDGDILVGF
DQSKLKRQMSELKSLKNNECPEVGDVASTMSGVIDICFSVEEQMKSRNER
EKDAPQNVIDLEEFVNLKTSYENVVRENNDLLRMKNDYENVKYEKDKLQH
EYKEVQKKLDETQGRLRSFENKSFEIPVNTKFDQEKEDLKSEVKKLKQEC
ERLNKRIKQVENDLTDSEQSFEKADERNCELEDQIMQMTENLKRFQMENQ
RLHELNNRNQQNTPMIDSLTSQLKLKDDEIQKMSAALESMKLETQTPSIS
SEELTDLRSKHEIVSKEKETLQEKNDKLEHDIREIQRNLNEAQDQLKSYE
NKTFEESAVIVVKDDEQPSKENKEEEESKTKDLLAKIETLESEIEQGKTL
EEDLKEKNKVLEDKIKSLKNQHEVLRKRDDRISNKYEALKDQFDSLKMKH
EEITQKKYEVPLQKSVDSPKPPSRPGSSFGSEYDMCETMTKTKPIPKPRT
LKRLSTGDPGKSISDDDRNSNNSSMSNSPQNSLNTEITNLKNEIDRLEKK
VKELTEKNGELQSVVDSLQPMKSRNQSLEQEIEELNGKLSDKMLEVGQLR
STLHQSGTELRRHKDQTSEMEGRHEKLHREKNENYSKLQQMTLKYNNKEK
ESNDMINMLKAERDSYHTERNNYRDEHGRLKMALQKIQVEFQENERQLRS
ENNHLKMDVDRLKGDVEAHKVQIQVFQTDFEYERETREKEAVKHQQMREE
YEKMKQQYEAYKKQNFDHIKNRHQQNPTASGYNPTGSAYGNYQQHNPQYG
SGTGGYNQYNPYNQYAGGGGGGGGGRQHQHNQYHGQGGGAQQQGGGGNNP
HSELAHRVCPKCNKRCPDIETLEIHLMDCLDD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007322XLOC_007322Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00013079TCONS_00013079Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR034735ZF_CCHC_NOA
Vocabulary: Molecular Function
TermDefinition
GO:0031593polyubiquitin binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0031593 polyubiquitin binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 454..502
NoneNo IPR availableCOILSCoilCoilcoord: 523..606
NoneNo IPR availableCOILSCoilCoilcoord: 834..865
NoneNo IPR availableCOILSCoilCoilcoord: 760..780
NoneNo IPR availableCOILSCoilCoilcoord: 680..714
NoneNo IPR availableCOILSCoilCoilcoord: 887..914
NoneNo IPR availableCOILSCoilCoilcoord: 61..81
NoneNo IPR availableCOILSCoilCoilcoord: 423..443
NoneNo IPR availableCOILSCoilCoilcoord: 806..826
NoneNo IPR availableCOILSCoilCoilcoord: 85..109
NoneNo IPR availableCOILSCoilCoilcoord: 271..322
NoneNo IPR availableCOILSCoilCoilcoord: 718..745
NoneNo IPR availableCOILSCoilCoilcoord: 385..405
NoneNo IPR availableCOILSCoilCoilcoord: 329..377
NoneNo IPR availableGENE3D1.20.5.170coord: 328..402
e-value: 1.5E-5
score: 24.5
coord: 403..503
e-value: 0.002
score: 17.7
NoneNo IPR availableGENE3D1.20.5.990coord: 817..912
e-value: 7.1E-7
score: 29.0
NoneNo IPR availableGENE3D1.10.287.620coord: 48..323
e-value: 0.036
score: 13.0
NoneNo IPR availableGENE3D1.20.5.400coord: 517..598
e-value: 5.9E-6
score: 25.7
coord: 668..729
e-value: 2.8E-8
score: 33.1
NoneNo IPR availableGENE3D1.20.5.730coord: 730..791
e-value: 0.0036
score: 16.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 603..689
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 754..779
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 967..1003
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 924..952
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..38
IPR034735Zinc finger CCHC NOA-typePROSITEPS51801ZF_CCHC_NOAcoord: 1001..1031
score: 18.782

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00013079-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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