TCONS_00013019-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00013019-protein
Unique NameTCONS_00013019-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1733

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00013019-protein ID=TCONS_00013019-protein|Name=TCONS_00013019-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1733bp
MLVNKEQLSSRRGSQFSLNSSMGVKDKFHQHPKVRVEARETVKEIDYQVQ
LRIIEARQLSGMQLDPVCTVTIGNQKKHTAVKEQTNTPFWDEFFVFDFKM
AACVLFDKIINFQVFTGRNLVTQGLLIGSFKLDIGTVYAQQDHRFVRRWA
VLTDPEETLGASGAGVKGYLKVDITVLGKGDPIKEPPSVKDNEDDIESNL
LLPDGVPAERPKARIVCKFYRAEGLPKMNSGLMANVKKAFTGEVRDLVDP
YVDVQFAGQRAKTSVKKHTYEPEWNEQITFAELFPPLCRRIRVQLKDGDA
VTDDVVGTHFIDLSQISNDGANGFMPTFGPCWVNLYGSTRDFSLFDEHNS
LNAGLGEGVGFRGRLLMAVQAEMGDSASDAAIKQVEVEATPPISDTASGK
EEVFQLYACIHAANMIERKTADRPIQFEMSIGNHGNTIDGQVVQEQPDPG
DKEIIDDRFVQSLTPPCKAVSTDRQYYHLPYEENKPCLHIKLQWQDHRRR
LYLSNMLYKLLETLTDNLDDIQERVKMDFDDTFKFLQRTLQELLQHCQHF
VSIADGRISGPTIGRTKLDRERNKLCLSEIRQVADQARSVLDSIHDNTHI
KENLKMVIEFQRKIQTIVTEPQDGVPDIFIWMLSGGKRVAYARIPAQHVI
YSQTDYERGRDAGRLQTVFLRLPGKRGDGPKGWTIQAKLNILIWLGLHKH
KKDMLKDAPKGFQMPKGANKVLAPPANHLLYSEQRKFILRAHLYQARSLI
GSDASGLSDAFARVVIGSKAADTRVIWETRSPTWDQMIIFNDIVIWGDVN
TIACNPPTIVTEIFDKDIGGDSEFIGRALSRPIVKLSHEKYEKPLFPPAL
EWFEIIRGDERAGELLAAFELLQVVEEGKCFLPEEVEPIDSPDGKILPVP
DGIRPIMKKHRIEVLFWGVREMKRVNLTTVDRPQVDADCAGHVAQSTVIV
NAKKNPNFANPVAYFDVDLPENERYCPPLTIRVRDCRTFGRFTLVGTHVV
NSLHKYLQDPDNYKHLAEVKRTDDSSRPQSPAPKKQAMVELYDDPIDDQE
NDKDEQLLNEPVSKKRAKSGESSGKKSGDDDEDDEESLDWWSRYYETVKD
EEREEEEKKVRENKQSKTNESMKKNKSKNIEDGDIEREKRIKTPNPKITR
ITIYRQELENITDFNGFNDWLHSFPLYRGKKTSDDDDDEHRIVGKFKGAI
KVWKHPLPKFLEVESPTASFFKLPSNEPVNVLIRCYIVRALDLHPTDING
KSDPYVVLTLGKQKMKDRDNYVSKQLNPIFGRVFDFEAIIPMDNMMTVGV
YDYDMVGSDDLIGETRIDIENRFYSRHRPTCGLSSIYATFGFNKWRDPMK
PTQILARICKDESLDGPHYTAPGKCRVENMIFAASSSITDEAGNTKPSDE
PCALKALHHFHRIPKKGFSLVAEHVETRSLYNPEKPGIEQGKIELWVDMF
AMDMPSPGAPVEITPRKPATYELRVIIWNTEDVLMDEINLVTGEACSDIY
VKGWLEGMKDEKQQTDVHYRSLTGEGNFNWRFVFPFQYQKAEEKIVIKKK
ANFFSWDESEEKVPSRLTLQVWDADAFSADDFIGDLCLDLAHMPRGAKTA
KTCSLDTMKVEKTISIFKAKHIKGWWPFAVNTDLEEIELAGKVEAELELL
TQEEAEKTPCGLGREEPQPLEKPNRPDTSFTWFMNPFKSLRYMIWEQYKF
CLLKFLVVAMLIALMALFFYSMPGYTVKKIFGA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007293XLOC_007293Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00013019TCONS_00013019Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012561Ferlin_B-domain
IPR000008C2_dom
IPR012968FerIin_dom
IPR032362Ferlin_C
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1095..1115
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1046..1086
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1101..1132
NoneNo IPR availableCDDcd08374C2F_Ferlincoord: 1472..1605
e-value: 2.89797E-72
score: 238.332
NoneNo IPR availableCDDcd04017C2D_Ferlincoord: 737..875
e-value: 3.39748E-61
score: 206.625
NoneNo IPR availableCDDcd04011C2B_Ferlincoord: 46..155
e-value: 5.68447E-54
score: 185.087
NoneNo IPR availableCDDcd04018C2C_Ferlincoord: 218..363
e-value: 7.69067E-85
score: 274.895
NoneNo IPR availableCDDcd04037C2E_Ferlincoord: 1232..1355
e-value: 1.6499E-63
score: 212.795
IPR012561Ferlin B-domainSMARTSM01201FerB_2coord: 621..697
e-value: 2.8E-42
score: 156.5
IPR012561Ferlin B-domainPFAMPF08150FerBcoord: 621..696
e-value: 4.8E-29
score: 100.7
IPR000008C2 domainSMARTSM00239C2_3ccoord: 738..846
e-value: 1.2E-4
score: 31.4
coord: 1232..1331
e-value: 2.7E-10
score: 50.2
coord: 1472..1602
e-value: 0.041
score: 23.0
coord: 214..325
e-value: 2.3E-11
score: 53.7
coord: 48..146
e-value: 3.3E-8
score: 43.3
IPR000008C2 domainGENE3D2.60.40.150coord: 186..342
e-value: 3.5E-19
score: 68.5
coord: 1093..1342
e-value: 7.0E-24
score: 83.7
IPR000008C2 domainGENE3D2.60.40.150coord: 726..874
e-value: 1.7E-15
score: 56.7
IPR000008C2 domainPFAMPF00168C2coord: 1494..1601
e-value: 0.001
score: 19.2
coord: 738..828
e-value: 4.8E-7
score: 29.9
coord: 1233..1321
e-value: 2.8E-17
score: 62.8
coord: 215..319
e-value: 2.4E-16
score: 59.8
coord: 48..141
e-value: 1.1E-10
score: 41.6
IPR000008C2 domainGENE3D2.60.40.150coord: 42..181
e-value: 1.2E-16
score: 60.5
IPR000008C2 domainGENE3D2.60.40.150coord: 906..1032
e-value: 6.2E-8
score: 32.2
IPR000008C2 domainGENE3D2.60.40.150coord: 1469..1655
e-value: 4.6E-20
score: 71.5
IPR000008C2 domainPROSITEPS50004C2coord: 214..310
score: 11.611
IPR000008C2 domainPROSITEPS50004C2coord: 1237..1316
score: 13.757
IPR000008C2 domainPROSITEPS50004C2coord: 739..829
score: 11.744
IPR000008C2 domainPROSITEPS50004C2coord: 48..131
score: 9.731
IPR000008C2 domainSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 48..192
IPR000008C2 domainSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 734..871
IPR000008C2 domainSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 1440..1605
IPR000008C2 domainSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 1214..1325
IPR000008C2 domainSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 211..340
IPR000008C2 domainSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 903..1004
IPR012968FerIin domainSMARTSM01202FerI_2coord: 132..206
e-value: 8.5E-39
score: 144.9
IPR012968FerIin domainPFAMPF08151FerIcoord: 153..206
e-value: 2.7E-18
score: 65.7
IPR032362Ferlin, C-terminal domainPFAMPF16165Ferlin_Ccoord: 1639..1730
e-value: 2.3E-29
score: 102.2

Blast
BLAST of TCONS_00013019-protein vs. Swiss-Prot (Human)
Match: OTOF (Otoferlin OS=Homo sapiens GN=OTOF PE=1 SV=3)

HSP 1 Score: 1746.1 bits (4521), Expect = 0.000e+0
Identity = 883/1782 (49.55%), Postives = 1222/1782 (68.57%), Query Frame = 0
Query:   32 PKVRVEARETVKEIDYQVQLRIIEARQLSGMQLDPVCTVTIGNQKKHTAVKEQTNTPFWDEFFVFDFKMAACVLFDKIINFQVFTGRNLVTQGLLIGSFKLDIGTVYAQQDHRFVRRWAVLTDPEETLGASGAGVKGYLKVDITVLGKGDPIKEPPSVKD-NEDDIESNLLLPDGVPAERPKARIVCKFYRAEGLPKMNSGLMANVKKAFTGEVRDLVDPYVDVQFAGQRAKTSVKKHTYEPEWNEQITFAELFPPLCRRIRVQLKDGDAVTDDVVGTHFIDLSQISNDGANGFMPTFGPCWVNLYGSTRDFSLFDEHNSLNAGLGEGVGFRGRLLMAVQAEMGDSASD--AAIKQVEVEATPPISDTASGKEEVFQLYACIHAANMIERKTADRPIQFEMSIGNHGNTIDGQVVQEQP----DPGDKEIID--------------DRFVQSLTPPCKAVSTDRQYYHLPYEENKPCLHIKLQWQDHRRRLYLSNMLYKLLETLTDNLDDIQERVKMDFDDTFKFLQRTLQELLQHCQHFVSIADGRISGPTIGRTKLDRERNKLCLSEIRQVADQARSVLDSIHDNTHIKENLKMVIEFQRKIQTIVTEPQDGVPDIFIWMLSGGKRVAYARIPAQHVIYSQTDYERGRDAGRLQTVFLRLPGKRGDGPKGWTIQAKLNILIWLGLHKHKKDMLKDAPKGFQMPKGANKV--LAPPANHLLYSEQRKFILRAHLYQARSLIGSDASGLSDAFARVVIGSKAADTRVIWETRSPTWDQMIIFNDIVIWGDVNTIACNPPTIVTEIFDKDIGGDSEFIGRALSRPIVKLSHEKYEKPLFPPALEWFEIIRGDERAGELLAAFELLQVVEEGKCFLPEEVEPIDSPDGKILPVPDGIRPIMKKHRIEVLFWGVREMKRVNLTTVDRPQVDADCAGHVAQSTVIVNAKKNPNFANPVAYFDVDLPENERYCPPLTIRVRDCRTFGRFTLVGTHVVNSLHKYLQDPDNY---------------KHLAEVKRTDDSS-------RPQSPAPKKQAMVELYDDPIDDQENDKDEQLLNEPVS-KKRAKSGESSGKKSGDDDEDDEES-LDWWSRYY---ETVKDEEREEEEKKV--RENKQSKTNESMKKN------------------KSKNIEDGDIEREKRIKTPNPKITRITIYRQELENITDFNGFNDWLHSFPLYRGKKTSDDDD---DEHRIVGKFKGAIKVWKHPLPKFLEVE----SPTASFFKLPSNEPVNVLIRCYIVRALDLHPTDINGKSDPYVVLTLGKQKMKDRDNYVSKQLNPIFGRVFDFEAIIPMDNMMTVGVYDYDMVGSDDLIGETRIDIENRFYSRHRPTCGLSSIYATFGFNKWRDPMKPTQILARICKDESLDGPHYTAPGKCRVENMIFAASSSITDEAGNTKPSDEPCALKALHHFHRIPKKGFSLVAEHVETRSLYNPEKPGIEQGKIELWVDMFAMDMPSPGAPVEITPRKPATYELRVIIWNTEDVLMDEINLVTGEACSDIYVKGWLEGMKDEKQQTDVHYRSLTGEGNFNWRFVFPFQYQKAEEKIVIKKKANFFSWDESEEKVPSRLTLQVWDADAFSADDFIGDLCLDLAHMPRGAKTAKTCSLDTMKVE---KTISIFKAKHIKGWWPFAVNTDLEEIELAGKVEAELELLTQEEAEKTPCGLGREEPQPLEKPNRPDTSFTWFMNPFKSLRYMIWEQYKFCLLKFLVVAMLIALMALFFYSMPGYTVKKIFGA 1733
            P +++E     + +DYQV + +IEARQL G+ +DPV  V +G+ KK+T++KE TN P+++E+FVFDF ++  V+FDKII   V   +NL+  G L+GSFK+D+GTVY+Q +H+F  +WA+L+DP++      +G+KGY+K D+ V+GKGD IK P    + +EDDIE NLLLP+GVP ER  AR   K YRAEGLP+MN+ LMANVKKAF GE +DLVDPYV V FAGQ+ KTSV+K +YEP WNEQ+ F +LFPPLC+R++VQ++D D V D  +GTHFIDL +ISNDG  GF+PT GP WVN+YGSTR+++L DEH  LN GLGEGV FR RLL+ +  E+ D+++    +  +V+VE   PIS++ +GK E F L+     A+MI+R+  D+PI FE++IGN+GN +DG    ++P    +PGD+E +D              D    S TPP +   TDR Y+HLPY E KPC++IK  W D RRRLY +N++  + + L + L+DIQE +K +     + L+  L+EL   C  F+S+AD +  G +  RT+LDRER K C+ E+  +  QAR +   +  +T +++ L++   F +K++ +  EPQ  +PDIFIWM+S  KRVAYAR+P++ +++S  + E G+D  +++T+FL+LPGKRG G  GWT+QAK+ + +WLGL K +K+ L   P GFQ  K A  +   A P   L+Y++++ F LRAH+YQARSL  +D+SGLSD FARV   +++  T V+ ET  PTWDQM++F+++ ++G+ + +  +PP IV EI+D+D  G ++F+GR  ++P+VK++ E Y  P FPP LE+++I RG+  AG+LLAAFELLQ+   GK  LP    P+D   G I+PVP GIRP++ K+R+EVLFWG+R++KRVNL  VDRP+VD +CAG   QS++I N KKNPNF   V +F+VDLPENE   PPL IRV DCR FGR+TLVG+H V+SL +++  P +                + L     +  S+        P+ P  K + MV+L         +   E ++   V+ +++ K  +  G     ++E+ +ES LDWWS+Y+   +T+K++ R++E   +   E ++    E +K +                  +S     G    EK+     PKI  + +Y +ELE  ++F+ F DWLH+F L RG KT DD+D   +E RIVG+FKG++ V+K PLP+ +  E    S    F  +PSN+P+NVL+R Y+VRA DLHP DINGK+DPY+ + LGK  ++D++NY+SKQLNP+FG+ FD EA  PM++M+TV VYD+D+VG+DDLIGET+ID+ENRFYS+HR TCG++  Y+T G+N WRDPMKP+QIL R+CKD  +DGPH+  PG+ +V N +F   S I DE G  KP+DE  AL AL H+  IP+ G  LV EHVETR L NP+KPGIEQG++ELWVDMF MDMP+PG P++I+PRKP  YELRVIIWNT++V++++ +  TGE  SDI+V+GWL+G +++KQ TDVHY SLTGEGNFNWR++FPF Y  AEEKIVI KK + FSWDE+E K+P+RLTLQ+WDAD FSADDF+G + LDL   PRGAKTAK C+++    E     +SIFK K +KGWWP     + +E EL GKVEAEL LLT EEAEK P GL R EP PLEKPNRPDTSF WF+NP KS RY +W  Y++ LLK L++ +L+ L+ALF YS+PGY VKKI GA
Sbjct:  240 PDIKMEP-SAGRPMDYQVSITVIEARQLVGLNMDPVVCVEVGDDKKYTSMKESTNCPYYNEYFVFDFHVSPDVMFDKIIKISVIHSKNLLRSGTLVGSFKMDVGTVYSQPEHQFHHKWAILSDPDDI----SSGLKGYVKCDVAVVGKGDNIKTPHKANETDEDDIEGNLLLPEGVPPERQWARFYVKIYRAEGLPRMNTSLMANVKKAFIGENKDLVDPYVQVFFAGQKGKTSVQKSSYEPLWNEQVVFTDLFPPLCKRMKVQIRDSDKVNDVAIGTHFIDLRKISNDGDKGFLPTLGPAWVNMYGSTRNYTLLDEHQDLNEGLGEGVSFRARLLLGLAVEIVDTSNPELTSSTEVQVEQATPISESCAGKMEEFFLFGAFLEASMIDRRNGDKPITFEVTIGNYGNEVDGLSRPQRPRPRKEPGDEEEVDLIQNASDDEAGDAGDLASVSSTPPMRPQVTDRNYFHLPYLERKPCIYIKSWWPDQRRRLYNANIMDHIADKLEEGLNDIQEMIKTEKSYPERRLRGVLEELSCGCCRFLSLAD-KDQGHS-SRTRLDRERLKSCMRELENMGQQARMLRAQVKRHT-VRDKLRLCQNFLQKLRFLADEPQHSIPDIFIWMMSNNKRVAYARVPSKDLLFSIVEEETGKDCAKVKTLFLKLPGKRGFGSAGWTVQAKVELYLWLGLSKQRKEFLCGLPCGFQEVKAAQGLGLHAFPPVSLVYTKKQAFQLRAHMYQARSLFAADSSGLSDPFARVFFINQSQCTEVLNETLCPTWDQMLVFDNLELYGEAHELRDDPPIIVIEIYDQDSMGKADFMGRTFAKPLVKMADEAYCPPRFPPQLEYYQIYRGNATAGDLLAAFELLQIGPAGKADLPPINGPVDVDRGPIMPVPMGIRPVLSKYRVEVLFWGLRDLKRVNLAQVDRPRVDIECAGKGVQSSLIHNYKKNPNFNTLVKWFEVDLPENELLHPPLNIRVVDCRAFGRYTLVGSHAVSSLRRFIYRPPDRSAPSWNTTVRLLRRCRVLCNGGSSSHSTGEVVVTMEPEVPIKKLETMVKL---------DATSEAVVKVDVAEEEKEKKKKKKGTAEEPEEEEPDESMLDWWSKYFASIDTMKEQLRQQEPSGIDLEEKEEVDNTEGLKGSMKGKEKARAAKEEKKKKTQSSGSGQGSEAPEKK----KPKIDELKVYPKELE--SEFDNFEDWLHTFNLLRG-KTGDDEDGSTEEERIVGRFKGSLCVYKVPLPEDVSREAGYDSTYGMFQGIPSNDPINVLVRVYVVRATDLHPADINGKADPYIAIRLGKTDIRDKENYISKQLNPVFGKSFDIEASFPMESMLTVAVYDWDLVGTDDLIGETKIDLENRFYSKHRATCGIAQTYSTHGYNIWRDPMKPSQILTRLCKDGKVDGPHFGPPGRVKVANRVFTGPSEIEDENGQRKPTDEHVALLALRHWEDIPRAGCRLVPEHVETRPLLNPDKPGIEQGRLELWVDMFPMDMPAPGTPLDISPRKPKKYELRVIIWNTDEVVLEDDDFFTGEKSSDIFVRGWLKGQQEDKQDTDVHYHSLTGEGNFNWRYLFPFDYLAAEEKIVISKKESMFSWDETEYKIPARLTLQIWDADHFSADDFLGAIELDLNRFPRGAKTAKQCTMEMATGEVDVPLVSIFKQKRVKGWWPLLARNENDEFELTGKVEAELHLLTAEEAEKNPVGLARNEPDPLEKPNRPDTSFIWFLNPLKSARYFLWHTYRWLLLKLLLLLLLLLLLALFLYSVPGYLVKKILGA 1997          
The following BLAST results are available for this feature:
BLAST of TCONS_00013019-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
OTOF0.000e+049.55Otoferlin OS=Homo sapiens GN=OTOF PE=1 SV=3[more]
back to top