TCONS_00013005-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00013005-protein
Unique NameTCONS_00013005-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length725

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00013005-protein ID=TCONS_00013005-protein|Name=TCONS_00013005-protein|organism=Clytia hemisphaerica|type=polypeptide|length=725bp
MLHCSVPLAKQNVKTVIRRAVKSATGLRFNSTDQKPQKMEVFVDGKRVLV
DPGTTVMQAAAMVGSEIPRFCYHDRLSVAGNCRMCLVEVEKSPKPVAACA
MPVMNGWSIKTDSPLTRKAREGVMEFILVNHPLDCPICDQGGECDLQDQS
MAFGNDRSRFVDVKFEGKAAFEDKNIGPLVKTIMTRCIQCTRCVRFGNEV
AGVEDLGTTGRGSDMQIGTYVEKMFKSELSGNIIDLCPVGALTSKPYAFT
ARPWELRKVESVDVMDAVGSNIVVGTRGGEIMRILPRINEDINEEWISDK
TRFAYDGLKRQRLNTPYIRGQDGNLQPCGWEDALVATAGELHACAPGDMA
VVAGNFVDAETLVATKDLFNRIGCENLYTEEGFPNAGAGTDLRSNYLFNS
TIAGIEEADALLIVGACPRYEAPLVNARIRKAWIHNELDVALVGKETDLT
YSYDHLGEEASVLQDIAAGKHPYSKVLAEAKRPVIIVGSNPLSTAEGESL
MAICSQISNGLKSKGSVEKDWKVLNVLHKVASQVAALDVGYKTGVENLGS
PKLLYLLGADSGKISRANLPKDCIVVYQGSHGDQGASMADIILPGAAYTE
KAATYVNMEGRAQETRRALTPPGLGRDDWKIIRAISEISGNALPYDSLAE
IRQRLTDVCPNLTRYGNVESANFFSQAASLYQGTRTSKGTLEPHISNLQD
FYMTDSISKASQTMAKCVQAVQNMR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007290XLOC_007290Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00013005TCONS_00013005Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019574NADH_UbQ_OxRdtase_Gsu_4Fe4S-bd
IPR010228NADH_UbQ_OxRdtase_Gsu
IPR012675Beta-grasp_dom
IPR006656Mopterin_OxRdtase
IPR015405NuoG_C
IPR000283NADH_UbQ_OxRdtase_75kDa_su_CS
IPR006963Mopterin_OxRdtase_4Fe-4S_dom
IPR0010412Fe-2S_ferredoxin-type
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0016651oxidoreductase activity, acting on NAD(P)H
GO:0051536iron-sulfur cluster binding
GO:0008137NADH dehydrogenase (ubiquinone) activity
GO:0009055electron carrier activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0042773ATP synthesis coupled electron transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042773 ATP synthesis coupled electron transport
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0016020 membrane
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0051536 iron-sulfur cluster binding
molecular_function GO:0008137 NADH dehydrogenase (ubiquinone) activity
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0016651 oxidoreductase activity, acting on NAD(P)H
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019574NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur bindingSMARTSM00929NADH_G_4Fe_4S_3_2coord: 120..160
e-value: 1.1E-19
score: 81.4
IPR019574NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur bindingPFAMPF10588NADH-G_4Fe-4S_3coord: 120..159
e-value: 4.2E-16
score: 58.1
IPR010228NADH:ubiquinone oxidoreductase, subunit GTIGRFAMTIGR01973TIGR01973coord: 41..635
e-value: 1.2E-222
score: 739.0
NoneNo IPR availablePFAMPF13510Fer2_4coord: 38..113
e-value: 4.4E-17
score: 61.8
NoneNo IPR availableGENE3D3.30.70.20coord: 144..251
e-value: 0.0033
score: 16.6
NoneNo IPR availableGENE3D3.40.50.740coord: 302..646
e-value: 2.8E-42
score: 144.2
NoneNo IPR availableCDDcd02773MopB_Res-Cmplx1_Nad11coord: 260..639
e-value: 0.0
score: 608.11
NoneNo IPR availableSUPERFAMILY548624Fe-4S ferredoxinscoord: 112..252
NoneNo IPR availableSUPERFAMILY53706Formate dehydrogenase/DMSO reductase, domains 1-3coord: 254..669
IPR012675Beta-grasp domainGENE3D3.10.20.30coord: 35..143
e-value: 1.6E-11
score: 43.5
IPR006656Molybdopterin oxidoreductasePFAMPF00384Molybdopterincoord: 312..637
e-value: 2.8E-60
score: 204.4
IPR015405NADH-quinone oxidoreductase, chain G, C-terminalPFAMPF09326NADH_dhqG_Ccoord: 668..717
e-value: 4.0E-14
score: 52.9
IPR000283NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved sitePROSITEPS00642COMPLEX1_75K_2coord: 135..147
IPR000283NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved sitePROSITEPS00641COMPLEX1_75K_1coord: 68..85
IPR000283NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved sitePROSITEPS00643COMPLEX1_75K_3coord: 186..196
IPR006963Molybdopterin oxidoreductase, 4Fe-4S domainPROSITEPS516694FE4S_MOW_BIS_MGDcoord: 256..312
score: 22.765
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPROSITEPS510852FE2S_FER_2coord: 37..115
score: 9.448
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainCDDcd00207fer2coord: 38..110
e-value: 1.04842E-9
score: 55.0936
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainSUPERFAMILY542922Fe-2S ferredoxin-likecoord: 39..111

Blast
[Close]
BLAST of TCONS_00013005-protein vs. Swiss-Prot (Human)
Match: NDUS1 (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Homo sapiens GN=NDUFS1 PE=1 SV=3)

HSP 1 Score: 993.801 bits (2568), Expect = 0.000e+0
Identity = 468/713 (65.64%), Postives = 567/713 (79.52%), Query Frame = 0 
Query:   17 IRRAV----KSATGLRFNSTDQKPQKMEVFVDGKRVLVDPGTTVMQAAAMVGSEIPRFCYHDRLSVAGNCRMCLVEVEKSPKPVAACAMPVMNGWSIKTDSPLTRKAREGVMEFILVNHPLDCPICDQGGECDLQDQSMAFGNDRSRFVDVKFEGKAAFEDKNIGPLVKTIMTRCIQCTRCVRFGNEVAGVEDLGTTGRGSDMQIGTYVEKMFKSELSGNIIDLCPVGALTSKPYAFTARPWELRKVESVDVMDAVGSNIVVGTRGGEIMRILPRINEDINEEWISDKTRFAYDGLKRQRLNTPYIRGQDGNLQPCGWEDALVATAGELHACAPGDMAVVAGNFVDAETLVATKDLFNRIGCENLYTEEGFPNAGAGTDLRSNYLFNSTIAGIEEADALLIVGACPRYEAPLVNARIRKAWIHNELDVALVGKETDLTYSYDHLGEEASVLQDIAAGKHPYSKVLAEAKRPVIIVGSNPLSTAEGESLMAICSQISNGLKSKGSVEKDWKVLNVLHKVASQVAALDVGYKTGVENL--GSPKLLYLLGADSGKISRANLPKDCIVVYQGSHGDQGASMADIILPGAAYTEKAATYVNMEGRAQETRRALTPPGLGRDDWKIIRAISEISGNALPYDSLAEIRQRLTDVCPNLTRYGNVESANFFSQAASLYQ--GTRTSKGTLEPHISNLQDFYMTDSISKASQTMAKCVQAV 721
            +R+A+    KS  G    +       +EVFVDG+ V+V+PGTTV+QA   VG +IPRFCYH+RLSVAGNCRMCLVE+EK+PK VAACAMPVM GW+I T+S  ++KAREGVMEF+L NHPLDCPICDQGGECDLQDQSM FGNDRSRF     EGK A EDKNIGPLVKTIMTRCIQCTRC+RF +E+AGV+DLGTTGRG+DMQ+GTY+EKMF SELSGNIID+CPVGALTSKPYAFTARPWE RK ES+DVMDAVGSNIVV TR GE+MRILPR++EDINEEWISDKTRFAYDGLKRQRL  P +R + G L    WEDAL   AG L +    D+A +AG  VDAE LVA KDL NR+  + L TEE FP AGAGTDLRSNYL N+TIAG+EEAD +L+VG  PR+EAPL NARIRK+W+HN+L VAL+G   DLTY+YDHLG+   +LQDIA+G HP+S+VL EAK+P++++GS+ L   +G +++A  S I+  ++    V  DWKV+N+LH++ASQVAALD+GYK GVE +    PK+L+LLGAD G I+R +LPKDC ++YQG HGD GA +AD+ILPGAAYTEK+ATYVN EGRAQ+T+ A+TPPGL R+DWKIIRA+SEI+G  LPYD+L ++R RL +V PNL RY ++E AN+F QA  L +    +     L P    ++DFYMTDSIS+ASQTMAKCV+AV
Sbjct:    6 VRKALVGLSKSPKGCVRTTATAASNLIEVFVDGQSVMVEPGTTVLQACEKVGMQIPRFCYHERLSVAGNCRMCLVEIEKAPKVVAACAMPVMKGWNILTNSEKSKKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGNDRSRF----LEGKRAVEDKNIGPLVKTIMTRCIQCTRCIRFASEIAGVDDLGTTGRGNDMQVGTYIEKMFMSELSGNIIDICPVGALTSKPYAFTARPWETRKTESIDVMDAVGSNIVVSTRTGEVMRILPRMHEDINEEWISDKTRFAYDGLKRQRLTEPMVRNEKGLLTYTSWEDALSRVAGMLQSFQGKDVAAIAGGLVDAEALVALKDLLNRVDSDTLCTEEVFPTAGAGTDLRSNYLLNTTIAGVEEADVVLLVGTNPRFEAPLFNARIRKSWLHNDLKVALIGSPVDLTYTYDHLGDSPKILQDIASGSHPFSQVLKEAKKPMVVLGSSALQRNDGAAILAAVSSIAQKIRMTSGVTGDWKVMNILHRIASQVAALDLGYKPGVEAIRKNPPKVLFLLGADGGCITRQDLPKDCFIIYQGHHGDVGAPIADVILPGAAYTEKSATYVNTEGRAQQTKVAVTPPGLAREDWKIIRALSEIAGMTLPYDTLDQVRNRLEEVSPNLVRYDDIEGANYFQQANELSKLVNQQLLADPLVPPQLTIKDFYMTDSISRASQTMAKCVKAV 714
The following BLAST results are available for this feature:
BLAST of TCONS_00013005-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NDUS10.000e+065.64NADH-ubiquinone oxidoreductase 75 kDa subunit, mit... [more]
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