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Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00012947-protein ID=TCONS_00012947-protein|Name=TCONS_00012947-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1123bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00012947-protein vs. Swiss-Prot (Human)
Match: ITAV (Integrin alpha-V OS=Homo sapiens GN=ITGAV PE=1 SV=2) HSP 1 Score: 179.104 bits (453), Expect = 9.269e-46 Identity = 283/1147 (24.67%), Postives = 450/1147 (39.23%), Query Frame = 0
Query: 1 NIDTDSSRIEYLDPLSNGDQDVNNHFGFAIGFFQKNDNAR--LIIGAPQYKNNT--------GALLTCRVNGLLKSC--TQMNATDSTSDLRKDKSL---NGELLGVSISTTEDSITACAPLAYGFLNKNPKCYNETTGQSYDPFTLPGPTNTSNDDVSRGCYESRNMFLGRCPVFADESTYQYSETPCYQTDETQPAYPNYGKCLLGYGDIQSFKLKNKLHQFITAPGSGLFTGSVVTTANGVKVSNF-INVLNVKDDSNFFDNQEVIINRWKYTGRTTMLGYSSTKGNFTGSVLPGLASGAPWSK-------LYDGEVVVYQYKLNSEQQTPDITQDDSILNVIDRITVPVQSKGGPGQFGGSIASIDVNGDGFDDLAIGAPMFSRQFGNRIGQEEGRVFIFINNGKAKFE---FNGNMTLTGENQENARFGATIINIGDINGDGTNDLAISAPWGGEDGNGAVYIYNVRDSQLFDKPTQILQSPVQG----GSFGYSITAAV-IDSRVYPALAIGAPLSNRVYVYKAKSIITLEDDLWVNRNTIPTDESNCRFKKTQYQ--CIDIKLNLKDISKNA-PEVFDVQVRIRAD-VRNSGEASR-VFIYSNATDSLTNDLIRNVTFTRDQEIPFSHRLYFSLARATNFDE---PVRVLTSY-----TSVDTERNCKDGPCAILDQFGTLKGLKEVRYLRQCGEDQVCDVDLDIEQTEIFVQKGSKSVIQPLFIGSFNDEITLKATVRNLNESAYQSKMEINFHDDFTLRQVSIPGRTITIPEYNGPVTNST-----NGIFDGTGKLVRFLLD--NPMLENETISVEAQFMVKSLPRPKFFQYPFKLSVNSTGNDANTTNNEVIAKLPMKIQTCVQVSFDQLGIETGIRRSVAEVLAYNATKKPIAQPLTVEEAGPMVSYNILVQNSGIVPIDNMSLDITLLDRVGEQNLVYVKELSIEG-ASCHLN-NINSGKIKQGNATLGVSANTTEATDKSI---ENKPSFSKDIIDCSSGQCQTMTCNDVLDFAV---DGSVRLKLTMFFYLEALQK----LNSKEMIIQISTRFGGKFGSITESAQECPQATELRQPFKKLEKIIVVKDRVEW-----------WVILVAVVGALILLDIFCVILYRVGFFKR 1073
N+D DS EY P ++FGFA+ FF + ++R L++GAP K NT G +L C + + C + +AT D KD L + + G S+ + +D I ACAPL + + Q +P +G C F + T PC D G C G+ S + PGS + G +++ VS + NV ++K ++NQ + + + LGYS G+F G + SG P + +YDG+ + Y EQ FG S+A+ D+NGD + D+ IGAP+F + + QE G+V + + F+ NG ARFG+ I +GD++ DG ND+AI+AP+GGED G VYI+N R + L P+QIL+ SFGYS+ A ID YP L +GA +R +Y+A+ +IT+ L V + + D C T + C +++ LK K P + QV + D ++ G R +F+YS + N I + +E L L + F + P+ + Y T+ DT G IL+QF ++ L CGED VC L E+ V K + +IG ++ +TL +N E AY++++ VSIP + ++ G V N+ + F + + + D NPM + +F V F L + S+ N + + V K+ + + V++ G+ S V + P T E+ GP+V + ++N+G L + + L+Y+ I+G +C + IN +IK S TTE D E +K + S G T+ C + G + + Y+++L +N + S + F I E P P + + +V V W WVI++AV+ L+LL + ++YR+GFFKR
Sbjct: 32 NLDVDSP-AEYSGP-------EGSYFGFAVDFFVPSASSRMFLLVGAP--KANTTQPGIVEGGQVLKCDWSST-RRCQPIEFDAT-GNRDYAKDDPLEFKSHQWFGASVRSKQDKILACAPLYH---------WRTEMKQEREP-------------------------VGTC--FLQDGTKTVEYAPCRSQDIDADGQ---GFCQGGF----SIDFTKADRVLLGGPGSFYWQGQLISDQVAEIVSKYDPNVYSIK-----YNNQ-LATRTAQAIFDDSYLGYSVAVGDFNGDGIDDFVSGVPRAARTLGMVYIYDGKNMSSLYNFTGEQMA--------------------------AYFGFSVAATDINGDDYADVFIGAPLFMDRGSDGKLQEVGQVSVSLQRASGDFQTTKLNGFEVF-------ARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGIVYIFNGRSTGLNAVPSQILEGQWAARSMPPSFGYSMKGATDIDKNGYPDLIVGAFGVDRAILYRARPVITVNAGLEVYPSILNQDNKTCSLPGTALKVSCFNVRFCLKADGKGVLPRKLNFQVELLLDKLKQKGAIRRALFLYSRSPSHSKNMTISRGGLMQCEE------LIAYLRDESEFRDKLTPITIFMEYRLDYRTAADTT-----GLQPILNQFTPANISRQAHILLDCGEDNVCKPKL-----EVSVDSDQKKI----YIGD-DNPLTLIVKAQNQGEGAYEAEL-----------IVSIPLQA----DFIGVVRNNEALARLSCAFKTENQTRQVVCDLGNPMKAGTQLLAGLRFSVHQQSEMD-TSVKFDLQIQSS-NLFDKVSPVVSHKVDLAVLAAVEIR----GVS-----SPDHVFLPIPNWEHKENPETEEDVGPVVQHIYELRNNGPSSFSKAMLHLQWPYKYNNNTLLYILHYDIDGPMNCTSDMEINPLRIKIS------SLQTTEKNDTVAGQGERDHLITKRDLALSEGDIHTLGCGVAQCLKIVCQVGRLDRGKSAILYVKSLLWTETFMNKENQNHSYSLKSSASFNVI-----EFPYKN---LPIEDITNSTLVTTNVTWGIQPAPMPVPVWVIILAVLAGLLLLAVLVFVMYRMGFFKR 1023 The following BLAST results are available for this feature:
BLAST of TCONS_00012947-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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