TCONS_00012905-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00012905-protein
Unique NameTCONS_00012905-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length494

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00012905-protein ID=TCONS_00012905-protein|Name=TCONS_00012905-protein|organism=Clytia hemisphaerica|type=polypeptide|length=494bp
FTFKMFSINDGWGTGEEQDILVSKLFDKPNSVDRINNNKKKKKQKNKGNI
NKQDADGSISKEPDQAKPKKNANGTNNSSENENFENKNNEENIENPGLKK
KKNKKRKLSGDLETTNTSAALLKALDIEDEDLLEINAENTDTQTIKKKKK
KKEKRKSEENNNILEHSITIKKTGIDETSVINNGLDFNEYDNLSGDKGTE
RDSKKKKKKSKKNRDKDNNSEQRTEKIDTETGNINSEEGDAKDLSTDDQE
KSPNIPESKSINSPKPNDAISKRLSKFQQKMNRKLEGGHFRYINEKLYTT
DSHMAVDMFKRQPSLFDVYHKGFESQVLHWPENPVDLIIEFIKEQSEDSI
VIDFGCGNAKIGRSVPQKVHSFDLVAVNDDVTVADMKNVPVKSGSVDIAV
FSLALMGTNVNDFIAEANRALKISGHLKIAEVKSRFKDVQHFIDGVISHG
FDLLSKDDTNKMFIMFDFEKTSNYNKNSKNDKTIELKPCIYKRR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007239XLOC_007239Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00012905TCONS_00012905Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007823RRP8
IPR029063SAM-dependent_MTases
Vocabulary: Cellular Component
TermDefinition
GO:0005730nucleolus
Vocabulary: Molecular Function
TermDefinition
GO:0008168methyltransferase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005730 nucleolus
molecular_function GO:0008168 methyltransferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 147..167
NoneNo IPR availableCOILSCoilCoilcoord: 81..101
NoneNo IPR availableGENE3D3.40.50.150coord: 333..494
e-value: 1.8E-29
score: 102.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..111
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 185..269
IPR007823Ribosomal RNA processing protein 8PFAMPF05148Methyltransf_8coord: 277..494
e-value: 1.4E-84
score: 283.2
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 315..460

Blast
[Close]
BLAST of TCONS_00012905-protein vs. Swiss-Prot (Human)
Match: RRP8 (Ribosomal RNA-processing protein 8 OS=Homo sapiens GN=RRP8 PE=1 SV=2)

HSP 1 Score: 235.343 bits (599), Expect = 5.908e-72
Identity = 108/241 (44.81%), Postives = 154/241 (63.90%), Query Frame = 0 
Query:  256 PESKSINSPKP-NDAISKRLSKFQQKMNRKLEGGHFRYINEKLYTTDSHMAVDMFKRQPSLFDVYHKGFESQVLHWPENPVDLIIEFIKEQSEDSIVIDFGCGNAKIGRSVPQKVHSFDLVAVNDDVTVADMKNVPVKSGSVDIAVFSLALMGTNVNDFIAEANRALKISGHLKIAEVKSRFKDVQHFIDGVISHGFDLLSKDDTNKMFIMFDFEKTSNYNKNSKNDKT-IELKPCIYKRR 494
            P  K+  SP P  D+   R    + +M ++L+G  FRY+NE+LY+  S  A  +F+  P  F +YH+GF+SQV  WP  PVD I   ++++    +V DFGCG+ ++  S+   VH FDL +++  VTV DM  VP++  SVD+AVF L+LMGTN+ DF+ EANR LK  G LK+AEV SRF+DV+ F+  V   GF ++SKD TN  F +FDF+KT       K   + ++L+PC+YKRR
Sbjct:  216 PTEKTEVSPVPRTDSHEARAGALRARMAQRLDGARFRYLNEQLYSGPSSAAQRLFQEDPEAFLLYHRGFQSQVKKWPLQPVDRIARDLRQRPASLVVADFGCGDCRLASSIRNPVHCFDLASLDPRVTVCDMAQVPLEDESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIVSKDLTNSHFFLFDFQKTGPPLVGPKAQLSGLQLQPCLYKRR 456
The following BLAST results are available for this feature:
BLAST of TCONS_00012905-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RRP85.908e-7244.81Ribosomal RNA-processing protein 8 OS=Homo sapiens... [more]
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