TCONS_00012777-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00012777-protein
Unique NameTCONS_00012777-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1652

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00012777-protein ID=TCONS_00012777-protein|Name=TCONS_00012777-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1652bp
YSSSNNQINMGPTLKFLRFSSGPNAERDLGIIGKAIEKSTSSEIDVEIIK
DAGEIKKLLESKPLSSQAIYVCFPFEGKVFEKLKESGFRIIGPQCVVSCL
MLEKAVPKLLYPVCNIAMEGVMACCSSMKKSDRKELYTLVEYMGGEVTAD
FTSAVTHLIANEVGSKKYIVAANQHIPIVSPSWIKHCWKISNFEHIVANS
EEILKKHILPVFKGCTICVSGLDASQREVIKALSSEHGAVYSGELNMKTC
THLLVKSATGTKYTYAKQWKLHCVLPDWFFDCIKQGHWLPEEPYKVEPEP
DSTMMTRSGNLTTRNEIEDTLPNRSSLTNKSTMLYASRAKGSSSSSTSVK
AAEVAAKSRKMRSTKNSNEENNCENEYFKIVFKFIKTDSLNVHDLTIQDC
GNYYLDGCEIFVAGEQGPVADVCRKIINNGGGMRSFELKESVTHVVVWEN
VSELVKKFLLDTDGSFPHVVSPTWLLDSFKSGEIMDEKGYSVMTVIEKGG
DVTQGPDEVFAKPSNLPSKSSTSSISRTSISMTTNSRFEEDVTDDLKLAD
QYMSRNHHESTAINQPGHLANQFRLSVSNLTVTDNDQTATLIDNDRTASM
EDETMTPFLRDMNFCVKYFNEEEAVNSMIEMSGGSITNSVEDCDHIIVPL
VYHKKREVHPKELTICWLETCYDYEEIQNAKECFLYRPHFVPKNLTRLLE
GCVVTVSQYSIMKKAHLFHFAEALGAVTQDFFVRKNSVRSGVELKASTHL
ILSKPEGSKYDASVKWKMPCVSKEWLVESLKAGRMLPEADFSLKECNAGA
NLSRIENLPQQVTTDHKTVQNPKQPTNNEQNLVSFDLSNRGASIMEGFDS
VTRPSISVDETQHAPPKTASKSETTKTSDEINNTETASQNATLKDIYSGK
RQETDFASFNTMIAQHSKSGVGEAPTCPAKLIPQNKENNNGFEIPADFKS
PKFALNKSRFSFDFGEALDGMQSPAVNSQDLRRKSSRKSRGSLPFDVQFT
EALQRAVDREVPEEQRKAIDESFTKKLHSEGILQDVVCVASRKLFSQQAQ
LYNMVRELGGDTKALYDSTCTHFIHQGRANDSSKDYVQAKDDGKYLVSPH
WLKACYENGERVNENEYPITYNPRMSLDVSRTVEKVLKSPVAAQKTSPRS
DTPKTGKPETLQLVKSPNNNKSLIVNTDDQTHSKANDTPKEKDNLAQNIL
QQNMQKKLEELMEASKQPRVRRSRRKTATDNRSIDATPKSEAASLSFNKR
LRSRNSSQKSCSESSNSNIGHNTNQAHLDIASEQSQAHTITYDDPTERAA
RERILAQLKDASPSQDIESFDHPINFHKFKQTPSTTTEAKQKTDEAVNSK
KDSAEYKTKVGTKTATSSNKADTSSNKPTNLLQSEDEDKETKQKQTDGKY
RFLFSGLTVQEKIEYGAVVEQLGGEFLDVQYFSTQCSHVIVNAPTRSEKY
LAAVSSGKWILHKSYLEASREAGRFVDEEDHEWGADLELQQFESSGKRLR
MELIEKRLEDPKFNIFKGWNVLMCIETSKVPGVKRIVEAGGGCILATRPP
FENKEGATHLFLTDPRLAEKYELNCQQFQDDGLWVLRLEYISDFLTIHPK
PSALNYVIAELKKDDESTTKRTSVAAVAGKRKATRVATPQKDKRLRRETS
NR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007174XLOC_007174Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00012777TCONS_00012777Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001357BRCT_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1197..1217
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1615..1652
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 807..832
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1310..1395
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1139..1193
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 849..896
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1212..1273
IPR001357BRCT domainSMARTSM00292BRCT_7coord: 696..783
e-value: 2.9E-8
score: 43.5
coord: 1030..1109
e-value: 6.5E-5
score: 32.3
coord: 115..191
e-value: 5.4E-12
score: 55.8
coord: 209..286
e-value: 6.4E-19
score: 78.9
coord: 1395..1473
e-value: 2.1E-7
score: 40.6
coord: 606..675
e-value: 5.0
score: 15.5
coord: 402..482
e-value: 1.2E-5
score: 34.7
IPR001357BRCT domainGENE3D3.40.50.10190coord: 598..688
e-value: 1.1E-6
score: 28.3
IPR001357BRCT domainGENE3D3.40.50.10190coord: 401..561
e-value: 2.2E-11
score: 43.3
coord: 693..898
e-value: 1.2E-19
score: 70.0
IPR001357BRCT domainGENE3D3.40.50.10190coord: 1501..1596
e-value: 0.02
score: 14.4
IPR001357BRCT domainPFAMPF12738PTCB-BRCTcoord: 745..775
e-value: 7.5E-7
score: 28.9
coord: 122..183
e-value: 1.2E-14
score: 53.9
coord: 215..278
e-value: 9.8E-18
score: 63.8
IPR001357BRCT domainPFAMPF00533BRCTcoord: 1032..1105
e-value: 1.1E-5
score: 25.6
coord: 1401..1468
e-value: 3.3E-7
score: 30.5
coord: 404..479
e-value: 4.7E-5
score: 23.6
IPR001357BRCT domainGENE3D3.40.50.10190coord: 118..193
e-value: 1.7E-17
score: 62.9
IPR001357BRCT domainGENE3D3.40.50.10190coord: 208..376
e-value: 2.6E-28
score: 98.0
IPR001357BRCT domainGENE3D3.40.50.10190coord: 1396..1500
e-value: 8.6E-20
score: 70.3
IPR001357BRCT domainGENE3D3.40.50.10190coord: 1034..1135
e-value: 3.0E-14
score: 52.6
IPR001357BRCT domainPROSITEPS50172BRCTcoord: 1028..1119
score: 13.061
IPR001357BRCT domainPROSITEPS50172BRCTcoord: 116..187
score: 14.647
IPR001357BRCT domainPROSITEPS50172BRCTcoord: 405..492
score: 12.978
IPR001357BRCT domainPROSITEPS50172BRCTcoord: 1399..1483
score: 11.058
IPR001357BRCT domainPROSITEPS50172BRCTcoord: 207..296
score: 17.763
IPR001357BRCT domainPROSITEPS50172BRCTcoord: 694..793
score: 13.562
IPR001357BRCT domainCDDcd00027BRCTcoord: 121..189
e-value: 2.27752E-13
score: 66.9614
IPR001357BRCT domainCDDcd00027BRCTcoord: 1401..1471
e-value: 1.33095E-7
score: 50.0127
IPR001357BRCT domainCDDcd00027BRCTcoord: 1036..1107
e-value: 3.07237E-5
score: 42.6939
IPR001357BRCT domainCDDcd00027BRCTcoord: 407..480
e-value: 8.91973E-4
score: 38.4567
IPR001357BRCT domainCDDcd00027BRCTcoord: 214..284
e-value: 1.36448E-10
score: 58.8722
IPR001357BRCT domainSUPERFAMILY52113BRCT domaincoord: 603..682
IPR001357BRCT domainSUPERFAMILY52113BRCT domaincoord: 667..794
IPR001357BRCT domainSUPERFAMILY52113BRCT domaincoord: 208..296
IPR001357BRCT domainSUPERFAMILY52113BRCT domaincoord: 1400..1484
IPR001357BRCT domainSUPERFAMILY52113BRCT domaincoord: 1039..1128
IPR001357BRCT domainSUPERFAMILY52113BRCT domaincoord: 75..190
IPR001357BRCT domainSUPERFAMILY52113BRCT domaincoord: 402..492

Blast
BLAST of TCONS_00012777-protein vs. Swiss-Prot (Human)
Match: TOPB1 (DNA topoisomerase 2-binding protein 1 OS=Homo sapiens GN=TOPBP1 PE=1 SV=3)

HSP 1 Score: 606.29 bits (1562), Expect = 0.000e+0
Identity = 474/1595 (29.72%), Postives = 767/1595 (48.09%), Query Frame = 0
Query:   67 QAIYVCFPFEGKVFEKLKESGFRIIGPQCVVSCLMLEKAVPKLLYPVCNIAMEGVMACCSSMKKSDRKELYTLVEYMGGEVTADFTSAVTHLIANEVGSKKYIVAANQHIPIVSPSWIKHCWKISNFEHIVANSEEILKKHILPVFKGCTICVSGLDASQREVIKALSSEHGAVYSGELNMKTCTHLLVKSATGTKYTYAKQWKLHCVLPDWFFDCIKQGHWLPEEPYKVEPEPDSTMMTRSGNLTTRNEIEDTLPNRSSLTNKSTMLYASRAKGSSSSSTSVKAAEVAAKSRKMRSTKNSNEENNCENEYFKIVFKFIKTDSLNVHDLTIQDCGNYYLDGCEIFVAGEQGPVADVCRKIINNGGGMRSFELKESVTHVVVWENVSELVKKFLLDTDGSFPHVVSPTWLLDSFKSGEIMDEKGYSVMTVIEKGGDVTQGPDEVFAKPSNLPSKSSTSSISRTSISMTTNSRFEEDVTDDLKLADQYMSRNHHESTAINQPGHLANQFRLSVSNLTVTDNDQTATLIDNDRTASMEDETMTPFLRDMNFCVKYF------NEEEA-VNSMIEMSGGSITN--SVEDCDHIIVPLVYHKKREVHPKELTICWLETCYDYEEIQNAKECFLYRPHFVPKNLTRLLEGCVVTVSQYSIMKKAHLFHFAEALGAVTQDFFVRKNSVRSGVELKASTHLILSKPEGSKYDASVKWKMPCVSKEWLVESLKAGRMLPEADFSLKECNAGANLSRIENLPQQVTTDHKTVQNPKQPTNNEQNLVSFDLSNRGASIMEGFDSVTRPSISVDETQHAPPKTASKSETTKTSDEINNTETASQNATLKDIYSGKRQETDFASFNTMIAQHSKSGVGEAPTCPAKLIPQNKENNNGFEIPADFKSPKFALNKSRFSFDFGEALDGMQSPAVNSQDLRRKSSRKSRGSLPFDVQFTEALQRAVDRE----VPEEQRKAIDESFTKKLHSEGILQDVVCVASRKLFSQQAQLYNMVRELGGDTKALYDSTCTHFIHQGRANDSSKDYVQAKDDGKYLVSPHWLKACYENGERVNENEYPITYNPRMSLDVSRTVE-KVLKSPVAAQKTSPRSDTPKTGKPETLQLVKSPNNNKSLIVNTDDQTHSKANDTPKEKDNLAQNI-LQQNMQKKLEELMEASK--QPRVRRSRRKTATDNRSIDATPKSEAASLSFNKR-LRSRNSSQKSCSESSNSNIGHNTNQAHLDIASEQSQAHTITYDDPTERAARERILAQLKDAS-PSQ------DIES-----FDHPINFHKFKQTPST------TTEAKQK--TDEAVNSKKDSAEYKTKVGTKTATSSNKADTSSNKPTNLLQSEDEDKETKQKQTDGKYRFLFSGLTVQEKIEYGAVVEQLGGEFLDVQYFSTQCSHVIVNAPTRSEKYLAAVSSGKWILHKSYLEASREAGRFVDEEDHEWGA----------DLELQQFESSGKRLRMELIEKRLEDPKFNIFKGWNVLMCIETSKVPGVKRIVEAGGGCILA--TRPPFENKEGATHLFLTDPRL-AEKYELNCQQFQDDGLWVLRLEYISDFLTIHPKPSALNYVIAE 1610
            +++Y+C PF G VF+ LK+ G RI+GPQ V+ C+  ++ VP+  +PV N+ M  V   C+S++K  R+E++  V+ MGG V  D   +VTHLIA EVGSKKY+VAAN   PI+ PSWIK  W+ S  + I   ++  ++    P+F GC ICV+GL    R+ ++ L+ +HG  Y G+L M  CTHL+V+   G KY  AK+W +HCV   WFFD I++G    E  YK EP P++                 T+PN S+ T++   +  SR     S+ +++ A+ V   S  + ++ NS  E   EN              L   D++        LDGC I++ G  G   D  R++IN+GGG+R  +L E VTHV+V +   EL  K   +     PHVV   WLL+ F  G ++ E+ Y     I       + P  V  KP    SK++      +S S    +  E+    D  L  QY    +  ST +      A  F  S     + D+   +   +N  + S     ++    +  F  K F      NE E+ + ++I+ + G I +  S    D+ +VPL+  +      + +T  WL TC DY+ + + K   L+ P  V   +T  LE CV++ SQ +  +K  L   A  LGA  Q++FVRK++ + G  + ASTHLIL +  GSKY+A+ KW +P V+  WL+E+ + G+   E+ F             IEN                  T  E++L +         I  G +      ++ D  +H   +  +  +T  T  ++N  ++ +  A +                    +QH++    +    PA   P  KE +   + P+ F S K  L K   SFD  +AL  +++P        R S +K + S P      + LQ A+       V       + E+ ++K  +   L  VV   S+KL  +Q++L  +   LG D +  +D T THFI+QGR ND++++Y   K+ G ++VS HWL  C +  + + E+ YP TYNP+MSLD+S   + ++  S + +  +S + D P         L+   N+  ++  N  +   S  +     K  L Q + +++N QK+L+E+M A+   +P+ +R+    +  N S  +TP S  ++ S   R L +   S+++                  D+ +E SQ   I +DDPT R  R R+ + L+  S P+Q      DI++     F  P++  +  +           TEA +   ++E     KDS    T      A        + +    ++  E+  +E K+     +Y F  S L  QE+I+Y  ++E+LGG  ++ Q F   C+H++V  P R+EKYLA+V++GKW+LH+SYLEA R AG FV EED+EWG+          +++ ++   +  R R ++ +++        F GW V++ ++ S+  G KR++++GG  +L   + P F+    ATHLF    +L  +   +N  +     ++ LR EYI+D+L     P   NY + E
Sbjct:   55 RSLYICDPFSGVVFDHLKKLGCRIVGPQVVIFCMHHQRCVPRAEHPVYNMVMSDVTISCTSLEKEKREEVHKYVQMMGGRVYRDLNVSVTHLIAGEVGSKKYLVAANLKKPILLPSWIKTLWEKSQEKKITRYTDINMEDFKCPIFLGCIICVTGLCGLDRKEVQQLTVKHGGQYMGQLKMNECTHLIVQEPKGQKYECAKRWNVHCVTTQWFFDSIEKGFCQDESIYKTEPRPEA----------------KTMPNSSTPTSQINTI-DSRTLSDVSNISNINASCV---SESICNSLNSKLEPTLEN--------------LENLDVSAFQAPEDLLDGCRIYLCGFSGRKLDKLRRLINSGGGVRFNQLNEDVTHVIVGDYDDEL--KQFWNKSAHRPHVVGAKWLLECFSKGYMLSEEPY-----IHANYQPVEIP--VSHKPE---SKAALLKKKNSSFSKKDFAPSEKHEQADEDLLSQY---ENGSSTVVEAKTSEARPFNDSTHAEPLNDSTHISLQEENQSSVSHCVPDVSTITEEGLFSQKSFLVLGFSNENESNIANIIKENAGKIMSLLSRTVADYAVVPLLGCEVEATVGEVVTNTWLVTCIDYQTLFDPKSNPLFTPVPVMTGMTP-LEDCVISFSQCAGAEKESLTFLANLLGASVQEYFVRKSNAKKG--MFASTHLILKERGGSKYEAAKKWNLPAVTIAWLLETARTGKRADESHF------------LIEN-----------------STKEERSLET--------EITNGIN------LNSDTAEHPGTRLQTHRKTVVTPLDMNRFQSKAFRAVV--------------------SQHAR----QVAASPAVGQPLQKEPSLHLDTPSKFLS-KDKLFKP--SFDVKDALAALETPG-------RPSQQKRKPSTPLSEVIVKNLQLALANSSRNAVALSASPQLKEAQSEKEEAPKPLHKVVVCVSKKLSKKQSELNGIAASLGADYRWSFDETVTHFIYQGRPNDTNREYKSVKERGVHIVSEHWLLDCAQECKHLPESLYPHTYNPKMSLDISAVQDGRLCNSRLLSAVSSTKDDEPDP-------LILEENDVDNMATNNKESAPSNGSGKNDSKGVLTQTLEMRENFQKQLQEIMSATSIVKPQGQRTSLSRSGCN-SASSTPDSTRSARSGRSRVLEALRQSRQTVP----------------DVNTEPSQNEQIIWDDPTAREERARLASNLQWPSCPTQYSELQVDIQNLEDSPFQKPLHDSEIAKQAVCDPGNIRVTEAPKHPISEELETPIKDSHLIPTPQAPSIAFPLANPPVAPHPREKIITIEETHEELKK-----QYIFQLSSLNPQERIDYCHLIEKLGGLVIEKQCFDPTCTHIVVGHPLRNEKYLASVAAGKWVLHRSYLEACRTAGHFVQEEDYEWGSSSILDVLTGINVQQRRLALAAMRWRKKIQQRQESGIVEGAFSGWKVILHVDQSREAGFKRLLQSGGAKVLPGHSVPLFKE---ATHLFSDLNKLKPDDSGVNIAEAAAQNVYCLRTEYIADYLMQESPPHVENYCLPE 1488          
The following BLAST results are available for this feature:
BLAST of TCONS_00012777-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TOPB10.000e+029.72DNA topoisomerase 2-binding protein 1 OS=Homo sapi... [more]
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