TCONS_00012776-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00012776-protein
Unique NameTCONS_00012776-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length330

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00012776-protein ID=TCONS_00012776-protein|Name=TCONS_00012776-protein|organism=Clytia hemisphaerica|type=polypeptide|length=330bp
KTIRMTIPICKDETTFKMLVQKAASHGQLVVLHFEADWAEECKQMNEVLE
ELAKEYTHTIFLRVEAEEVEKVTLHYEIESVPSFVLLKEQKVLTKVEGAD
AAKLSSAVKHYATSHIAPTIQPDKTENINEKLKKLINARPCMLFMKGNPS
EPKCGFSRQVIQILQEQEVKFGSFDILSDNEVRQGLKTYSDWPTYPQFYV
NGELLGGLDIIKELIENGEFKDMLPKPEDLNKRLETLTKQHKLMIFMKGN
REAPKCKFSRALMEIMQPLNLDFQTFDILQDEEVRQGLKTFSNWPTFPQI
YVNGEFVGGLDIIKELKENDELESTLKPSS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007173XLOC_007173Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00012776TCONS_00012776Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR004480Monothiol_GRX-rel
IPR002109Glutaredoxin
IPR033658GRX_PICOT-like
IPR012336Thioredoxin-like_fold
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
Vocabulary: Molecular Function
TermDefinition
GO:0015035protein disulfide oxidoreductase activity
GO:0009055electron carrier activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0015035 protein disulfide oxidoreductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 35..59
NoneNo IPR availableGENE3D3.40.30.10coord: 229..330
e-value: 1.3E-30
score: 105.2
coord: 135..228
e-value: 1.7E-32
score: 111.2
NoneNo IPR availableGENE3D3.40.30.10coord: 5..134
e-value: 6.0E-18
score: 64.6
NoneNo IPR availableSFLDSFLDG00327monothiol_Grx-likecoord: 128..216
e-value: 1.8E-41
score: 135.1
coord: 230..317
e-value: 5.1E-40
score: 130.4
NoneNo IPR availableCDDcd02984TRX_PICOTcoord: 16..109
e-value: 1.88582E-30
score: 110.824
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 12..109
e-value: 4.0E-16
score: 58.7
IPR004480Monothiol glutaredoxin-relatedTIGRFAMTIGR00365TIGR00365coord: 129..224
e-value: 4.7E-37
score: 124.1
IPR002109GlutaredoxinPFAMPF00462Glutaredoxincoord: 142..204
e-value: 1.2E-15
score: 57.3
coord: 244..307
e-value: 7.1E-17
score: 61.3
IPR002109GlutaredoxinPROSITEPS51354GLUTAREDOXIN_2coord: 231..330
score: 23.646
IPR002109GlutaredoxinPROSITEPS51354GLUTAREDOXIN_2coord: 129..231
score: 24.557
IPR033658Glutaredoxin, PICOT-likeCDDcd03028GRX_PICOT_likecoord: 234..323
e-value: 8.32777E-52
score: 167.285
IPR033658Glutaredoxin, PICOT-likeCDDcd03028GRX_PICOT_likecoord: 132..221
e-value: 1.55675E-56
score: 179.226
IPR012336Thioredoxin-like foldSUPERFAMILY52833Thioredoxin-likecoord: 127..226
IPR012336Thioredoxin-like foldSUPERFAMILY52833Thioredoxin-likecoord: 229..327
IPR012336Thioredoxin-like foldSUPERFAMILY52833Thioredoxin-likecoord: 24..117

Blast
[Close]
BLAST of TCONS_00012776-protein vs. Swiss-Prot (Human)
Match: GLRX3 (Glutaredoxin-3 OS=Homo sapiens GN=GLRX3 PE=1 SV=2)

HSP 1 Score: 346.28 bits (887), Expect = 4.904e-119
Identity = 161/300 (53.67%), Postives = 220/300 (73.33%), Query Frame = 0 
Query:   29 LVVLHFEADWAEECKQMNEVLEELAKEYTHTIFLRVEAEEVEKVTLHYEIESVPSFVLLKEQKVLTKVEGADAAKLSSAVKHYATS-HIAPTIQPDKTENINEKLKKLINARPCMLFMKGNPSEPKCGFSRQVIQILQEQEVKFGSFDILSDNEVRQGLKTYSDWPTYPQFYVNGELLGGLDIIKELIENGEFKDMLPKPEDLNKRLETLTKQHKLMIFMKGNREAPKCKFSRALMEIMQPLNLDFQTFDILQDEEVRQGLKTFSNWPTFPQIYVNGEFVGGLDIIKELKENDELESTLK 327
            L+V+HF A WA +C QMNEV+ ELAKE     F+++EAE V +V+  YEI SVP+F+  K  + + +++GA A +L+  V+ +A+S    P+      E++N +LKKL +A PCMLFMKG P EP+CGFS+Q+++IL +  ++F SFDI SD EVRQGLK YS WPTYPQ YV+GEL+GGLDIIKEL  + E   + PK   L +RL+ LT +  +M+FMKGN++  KC FS+ ++EI+    ++++TFDIL+DEEVRQGLK +SNWPT+PQ+YV GE VGGLDI+KELKEN EL   L+
Sbjct:   33 LLVVHFWAPWAPQCAQMNEVMAELAKELPQVSFVKLEAEGVPEVSEKYEISSVPTFLFFKNSQKIDRLDGAHAPELTKKVQRHASSGSFLPSANEHLKEDLNLRLKKLTHAAPCMLFMKGTPQEPRCGFSKQMVEILHKHNIQFSSFDIFSDEEVRQGLKAYSSWPTYPQLYVSGELIGGLDIIKELEASEELDTICPKAPKLEERLKVLTNKASVMLFMKGNKQEAKCGFSKQILEILNSTGVEYETFDILEDEEVRQGLKAYSNWPTYPQLYVKGELVGGLDIVKELKENGELLPILR 332
The following BLAST results are available for this feature:
BLAST of TCONS_00012776-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GLRX34.904e-11953.67Glutaredoxin-3 OS=Homo sapiens GN=GLRX3 PE=1 SV=2[more]
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