TCONS_00012749-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00012749-protein
Unique NameTCONS_00012749-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length317

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00012749-protein ID=TCONS_00012749-protein|Name=TCONS_00012749-protein|organism=Clytia hemisphaerica|type=polypeptide|length=317bp
MADSEVLSGDFDEGSKLFKSLLVDTKSDLDKAYESYQKGPEANLVAPKPG
WCIKTWKTDGEKVFMNVCTSDMVLKPKDLSEDEVRKIVESEDPTKFRIPM
GIGEAHKEHENSGKEVDVYDIVIHPEFFTKCQQQSFFKEFFIMLIFDGLE
AKYELNLNREYKILKNRKAMGTLQMQTVRSKSKPVIMEMDPVMAELEQEQ
LDEQRQKQQIMSEVSSTKYTSTHRTQQKYVEPKFTMIKEPDEGTPEFLVF
EISLPKQNSSKNVILDVGEDCLILHASDGNYKMDLDLPYNVNNDETGAQF
NKKTKVLTVTLPVLVNS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007148XLOC_007148Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00012749TCONS_00012749Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012981PIH1_dom
IPR008978HSP20-like_chaperone
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 193..213
NoneNo IPR availableCDDcd00298ACD_sHsps_p23-likecoord: 244..312
e-value: 4.72459E-4
score: 36.4131
IPR012981PIH1 domainPFAMPF08190PIH1coord: 37..313
e-value: 1.0E-59
score: 202.9
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 215..316
e-value: 3.6E-11
score: 42.6
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 246..311

Blast
[Close]
BLAST of TCONS_00012749-protein vs. Swiss-Prot (Human)
Match: PIHD1 (PIH1 domain-containing protein 1 OS=Homo sapiens GN=PIH1D1 PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 2.163e-47
Identity = 95/315 (30.16%), Postives = 167/315 (53.02%), Query Frame = 0 
Query:    1 MADSEVLSGDFDEGSKLFKSLLVDTKSDLDKAYESYQKGPEANLVAPKPGWCIKTWKTDGEKVFMNVCTSDMVLKPKDLSEDEVRKIVESEDPTKFRIPMGIGEAHKEHENSGKEVDVYDIVIHPEFFTKCQQQSFFKEFFIMLIFDGLEAKYELNLNREYKILKNRKAMGTLQMQTVRSKSKPVIMEMDPVMAELEQEQLDEQRQKQQIMSEVSSTKYT-STHRTQQKYVEPKFTMIKEPDEGTPEFLVFEISLPKQNSSKNVILDVGEDCLILHASDGNYKMDLDLPYNVNNDETGAQFNKKTKVLTVTLPVL 314
            ++++E +  D    S  F+ LL+    +L +A  +    PE+  + P+PG+CIKT  ++G KVF+N+C S  +  P D++E+E+ + +  ED   FRIPM +GE H E +  G+    YD+ ++ +F+ + Q   F +E  I +  +GLE KY L LN E++++KNR  MG++  Q +RS+ +P I E+  +                          YT +  R +    +P   +  E     P+ L+ E+ LPK + +  + L++GE+ L++      Y +D  +P  +N+ E+ A F++K K L V +P+L
Sbjct:   11 LSEAEAIGAD----SARFEELLLQASKELQQAQTTR---PESTQIQPQPGFCIKTNSSEG-KVFINICHSPSIPPPADVTEEELLQ-MLEEDQAGFRIPMSLGEPHAELDAKGQGCTAYDVAVNSDFYRRMQNSDFLRELVITIAREGLEDKYNLQLNPEWRMMKNRPFMGSISQQNIRSEQRPRIQELGDL--------------------------YTPAPGRAESGPEKPHLNLWLE----APDLLLAEVDLPKLDGALGLSLEIGENRLVMGGPQQLYHLDAYIPLQINSHESKAAFHRKRKQLMVAMPLL 286
The following BLAST results are available for this feature:
BLAST of TCONS_00012749-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PIHD12.163e-4730.16PIH1 domain-containing protein 1 OS=Homo sapiens G... [more]
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