TCONS_00012745-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00012745-protein
Unique NameTCONS_00012745-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length128

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00012745-protein ID=TCONS_00012745-protein|Name=TCONS_00012745-protein|organism=Clytia hemisphaerica|type=polypeptide|length=128bp
RTDNQIQSTIRKTFISCTVLTVAHRLNTIMDCDRIMVLDAGNIVEFDLPY
KLLQIPNGHFNQLVQQNSDEEVSRLTEVAKTSAIERNIDLDQIDKEMASQ
IPVLNIPTIMYDDADDIGMINTTFQDNE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007146XLOC_007146Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00012745TCONS_00012745Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..103
e-value: 3.8E-12
score: 45.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..65

Blast
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BLAST of TCONS_00012745-protein vs. Swiss-Prot (Human)
Match: MRP4 (Multidrug resistance-associated protein 4 OS=Homo sapiens GN=ABCC4 PE=1 SV=3)

HSP 1 Score: 83.5741 bits (205), Expect = 7.875e-20
Identity = 39/66 (59.09%), Postives = 48/66 (72.73%), Query Frame = 0 
Query:    1 RTDNQIQSTIRKTFISCTVLTVAHRLNTIMDCDRIMVLDAGNIVEFDLPYKLLQIPNGHFNQLVQQ 66
            RTD  IQ  IR+ F  CTVLT+AHRLNTI+D D+IMVLD+G + E+D PY LLQ     F ++VQQ
Sbjct: 1210 RTDELIQKKIREKFAHCTVLTIAHRLNTIIDSDKIMVLDSGRLKEYDEPYVLLQNKESLFYKMVQQ 1275
The following BLAST results are available for this feature:
BLAST of TCONS_00012745-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MRP47.875e-2059.09Multidrug resistance-associated protein 4 OS=Homo ... [more]
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