TCONS_00012643-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00012643-protein
Unique Name	TCONS_00012643-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1047

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00012643-protein ID=TCONS_00012643-protein|Name=TCONS_00012643-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1047bp
MVGKTEVQSKALAAQKPALPPILAMDHPKRDNVPENLLNTLTQAGKKFQN
LGPRNNNNNSTKKPAIKRNDNVWNHEKGRGKFKHLLEQPTCYCGAGSDIS
YLMDATTKKSEPLEEDSKPISTTEKLDSSIDHGKTMIPESIIPSEFHIKK
HKGVMGMEIHQNQFTTLPEEHEEHFTIFPSMKPSGRQEALQLMQVMNTLL
KKAGIEEPTSECEELNTQESDSQEESQIEALLNLVKEEQKVYNIIFNEVI
RQVSVECIERGTVLAELRKRYAKMLDRVPKQVKSLHEEVLAQRALDRRLT
EELGRFKTSITLLTKELHEIHAHDEEVTRQAIETQAELNEALKESEKNAS
LLAEYHDLYELQRRRLDYQLSKLIEERDLWAGSAHMLSLKVTDKHNLVTV
RRLHLYQKAWHKLANRFTVVLGQSDAKQLQEIAGHCRKWQETVISFDEKL
REAEQEAYRRMKSVQSSLKLWSEKFDRVVTPTHGSVHPLEQDDLQSLFNI
LKSWEEIFNSEVERYSGDVLLSYEDDLLCLNNCMDAWTRCSIKVYGNHAV
QDGTSKQREAMLDLNEEVERLHYDFQLRMSGENGVVPCYLNIFNALDTWV
NKVNVLVHGGETMFDSEWVQLTDLFQSQWPETLQKVLNILSPEDEHFELG
GHPPEDSRLNLSDGTDIQTISKNATIEKVEKWLLNIINGFENENTNMIEQ
VSTTHWNMIRWLVTILIRMAPDHKSPKTPIRGAEEDKLTGLGSAILKEST
SDAIIDRCTMIFNSLRSLTDLIVACCKDLSNGTPDVTNNAVEKIIEDSAK
DAKNLEQECQGWMNTANLLIKELTGQSIPMKDFIPPSKAKRGGQQKQDNE
NKSITEQPKIGVSGQENNPETGEKKEGQPMVVLNSADKKNEANVPSSEKQ
DGKGMPAINVGEGAQANKTADEADSSPDSDEESEEGEESDDGSQMLVIGN
DENVKRTSVNEQTENMNNNQKNITIDVTSPSLSLEALSTLEKLQTQLIET
EDRAQQAEEKLYATENELKEANERIRALERSLSRMESKSETSTPLPP

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_007091	XLOC_007091	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00012643	TCONS_00012643	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019347	Axonemal_dynein_light_chain

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 990..1038
None	No IPR available	COILS	Coil	Coil	coord: 328..348
None	No IPR available	COILS	Coil	Coil	coord: 788..822
None	No IPR available	COILS	Coil	Coil	coord: 436..456
None	No IPR available	GENE3D	1.10.287.160		coord: 545..1038 e-value: 0.11 score: 12.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..128
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 829..954
IPR019347	Axonemal dynein light chain	PFAM	PF10211	Ax_dynein_light	coord: 178..347 e-value: 1.2E-7 score: 31.8

Blast

[Close]

BLAST of TCONS_00012643-protein vs. Swiss-Prot (Human)
Match: AXDN1 (Axonemal dynein light chain domain-containing protein 1 OS=Homo sapiens GN=AXDND1 PE=2 SV=1)

HSP 1 Score: 394.045 bits (1011), Expect = 1.772e-120
Identity = 241/817 (29.50%), Postives = 427/817 (52.26%), Query Frame = 0

Query:   33 VPENLLNTLTQAGKKFQNLGPRNNNNNSTKKPAIKRN------DNVWNHEKGRGKFKHLLEQPTCYCGAGSDISYLMDATTKKSEPLEEDSKPISTTEKLDSS----IDHGKTMIPESIIPSEFHIKKHKGVMGMEIHQNQFTTLPEEHEEHFTIFPSMKPSGRQEALQLMQVMNTLLKKAGIEEPTSECEELNTQESDSQEESQIEALLNLVKEEQKVYNIIFNEVIRQVSVECIERGTVLAELRKRYAKMLDRVPKQVKSLHEEVLAQRALDRRLTEELGRFKTSITLLTKELHEIHAHDEEVTRQAIETQAELNEALKESEKNASLLAEYHDLYELQRRRLDYQLSKLIEERDLWAGSAHMLSLKVTDKHNLVTVRRLHLYQKAWHKLANRFTVVLGQSDAKQLQEIAGHCRKWQETVISFDEKLREAEQEAYRRMKSVQSSLKLWSEKFDR--VVTPTHGSVHPLEQDDLQSLFNILKSWEEIFNSEVERYSGDVLLSYEDDLLCLNNCMDAWTRCSIKVYGNHAVQDG-TSKQREAMLDLNEEVERLHYDFQLRMSGENGVVPCYLNIFNALDTWVNKVNVLVHGGETMFDSEWVQLTDLFQSQWPETLQKVLNILSPEDEHFELGGHPPEDSRLNLSDGTDIQTIS--KNATIEKVEKWLLNIINGFENENTNMIEQVSTTHWNMIRWLVTILIRMAPDHKSPKTPIRGAEED-KLTGLGSAILKESTSDAIIDRCTMIFNSLRSLTDLIVACCKDLSNGTPDVTNNAVEKIIEDSAKDAKNLEQECQGWMNTANLLIKELTGQSIPMKDF 833
            +P+ +L +LT A     N GP   N    KK    +       D+VW+H   R KFK+L++ P    GAG DIS+L D T  K +  E+   P      L S     + H    + +++IP EFHI    GV G+E + +++TTL  + E    +FPSMKP+ R E  QL  VM+T+L++AG+E           QE      +++  LL+++K+EQ +YN+IF+E+IRQVSV+C +RG +L+++R+RY +MLD++ +Q+   +++++ QR +D+R+ EEL  FK  I  LT+EL  + AHD ++T++  +   +L +AL  +EKNA ++ EYHDLY LQR R++  + KL+ ERD+W+ + + L+LKV +++ ++  RRL+L +K W+K    F ++L   D + L  +    +KW+  V    +++ + E+     +K V+  L  W E F+   +++P  G++         S+    K W++I N + E ++GDVLLS  D L  + +  + W    + ++  H   +G    +R+ M ++ + +++L+ ++++R++G+NG      ++ ++LD                F  E ++  D    +W E  +K+  + S  D    L G  P+          D+ ++S  +      +++WLL I N   N N  +   +   H +MI+W+V +LI M P+       ++  EE  +   +G A L+    DAI      +   L   +  + +CCK +        +    K   +   +   L++EC  W+NT + L+  + G+ I +  +
Sbjct:   59 IPKEVLLSLTYAA----NAGPCPENLLPPKKIKTPKGTLPRLVDHVWHHPVRRNKFKYLIDHPVSLTGAGRDISFLYDVTYAKGQTREKAVCPPHLARSLQSHDGVIVPHKPKTLTDTLIPEEFHIVSSTGVSGLECYDDKYTTLLTDSENRLLLFPSMKPNKRVEVAQLNDVMDTMLERAGVE----------NQEYTGP--TKMHKLLHILKKEQTIYNMIFHELIRQVSVDCADRGELLSKVRERYVQMLDQIARQMIDFYKDLVTQRVMDQRILEELYNFKHVIEELTRELCLVRAHDVKLTKETEKAHKDLAQALLNAEKNAKIVEEYHDLYTLQRERMENDMKKLVAERDIWSSATYELALKVIERNRVILARRLYLNEKGWNKYTKHFIILLSNKDTEDLALLQKLTQKWRNLVNKLKQEVEQMEESTSETLKIVKDGLIKWQEFFNEKDILSPNKGNI-------FNSVLLDFKQWQKILNEKKEEFTGDVLLSKYDTLKIIKHLQENWADIGLGIFNRHKSLEGEMPSERQYMEEIIKNIQKLYKEYEIRINGDNGYSKILPSLISSLDF-------------CSFKLENLEFPDTPLEEWQEIDEKINEMKSHLDILLNLTGIVPQH--------IDVDSVSVLQAYIFNMIQQWLLKIGNEINNGNIELQHHMDELHISMIQWMVNLLILMIPNFTDQDCLLKLEEESAEKHDIGVARLE---LDAI-----ELTRKLYQYSSYLSSCCKGMVTAMALSKSTNSHKNATEDLYEVDKLKKECYEWINTCSCLLSNIKGRKITLLTY 823

The following BLAST results are available for this feature:

BLAST of TCONS_00012643-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00012643-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
AXDN1	1.772e-120	29.50	Axonemal dynein light chain domain-containing prot...	[more]

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TCONS_00012643-protein (polypeptide) - C. hemisphaerica