TCONS_00012640-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00012640-protein
Unique NameTCONS_00012640-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1333

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00012640-protein ID=TCONS_00012640-protein|Name=TCONS_00012640-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1333bp
MSILKGGEDDGYNAAFLGADLELDSTRRREVSLYRHNELVLTVEHGVTLG
FLKLMYSSDPKFPGMLQGVKSRSTSNQSPVTSVLLNDERVLDQDEYELIV
LDHSGNEAMLQQNLAPLPPPSPASIAALPSAEQCSVSISSTTQQQQPQQQ
PRRQTTSVQSTKSANKKQGEFVCEYCHLPFVSKAKFLRHRRIHTEENPYE
CVHCHQSFSHHADLRNHRNEHHMTNKAFKCDFCPKSFSSRAELKGHLWRH
TGEKNEKCQICGKAFATKGNLKLHVDKHIGVLKHKCPFCPQYFTSHSSLE
AHMAKHTGMKAYKCRYCSKSYAQAGQLTSHERIHTGEKPFVCQVCGKGFR
LNSTRLAHEKRHSGVRPHICDTCGRSFSMPDHLRRHLKTHQDKLDRLVPC
PFCKKKIFSGRNMRKHLVRHRELNLTEEQAKAIASSLKPDRDLNEREAVD
DDQRSHVSNRSVRQMIRCIECNEEIKSVRKLFEHMASVHFQRDLTVVERK
EIRLKHGLQKLHHCPFCSAFFIDYRVLRSHVLAEHPQRAEAIGFSNRNSE
AVNANATYKCPNCSMFFHLKGALDQHIIKEHLTTVIEDDSKSETAPQFRC
WYCRLTFPSPEEVVSHMTSQHETLDVISKRVEKMTGENDVTSSGLWTCSH
CPMSLKSHEEYVEHVAMHSIETGTEPGNSTLKTTKVNSSTDEASKYLNPM
RIEVNPENSDHHNQVDKYLTTSSIASPSVAMQLLNAKDVMTSSTKTHTVT
SIIVTDPSIVTSNEEMYLTTSSLSATVADVDLASSDLTQVDFLRLTNSST
DLIKIGDAAEKSERFQNLIKKNITLINTDAERNSHGTDLLENAKKSVARN
VKKAAKNKNNPAAILVSPLGEHPIEACKQCSAIFKTKLDLQLHVKRSHAD
DIPSVTGTSASIATPTPSSPFRCWFCKTTFESPEEVVVHMTNEHDNIDNL
SRRVEMSEQIPHTATLSASSSKLNEEIKNTLKLKHLKRSADASLSAVDGQ
SCPKCPKKLGSKEAFELHLMVHEAIDQIEHPPNVALLNRQKSLDRTSTGA
HAQLYEVSLSAEPISMEESASPSFPIKESTSTHKSIATSTKQLSIIDPST
SKVDTKTVTTVANASKNPAATRNKKSKTKAKVVSASSISKKSITTASSTR
NKTNVAVDIDNVNMCTHCSRVFCGRKALYVHTLKMHGKEYLQKRTPPVKQ
SAFTCWFCSTNFSSPELVVEHMTEAHENLDNLSKRVERQNLSISDSSSVK
GPDAPVNLPRFIPIAPQKQVVPVSALRTSPSSGAPITCTPRVDGNQQPPP
GFKVSYALAYVPVFVPEKHDDAASDNDDRPKKN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007090XLOC_007090Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00012640TCONS_00012640Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1219..1242
NoneNo IPR availableGENE3D3.30.160.60coord: 292..304
e-value: 2.7E-5
score: 23.5
NoneNo IPR availableGENE3D2.40.155.10coord: 243..291
e-value: 8.3E-22
score: 77.9
NoneNo IPR availableGENE3D2.20.28.30coord: 325..344
e-value: 2.4E-12
score: 46.3
NoneNo IPR availableGENE3D3.30.160.60coord: 658..888
e-value: 0.012
score: 15.5
coord: 1013..1177
e-value: 0.017
score: 15.0
NoneNo IPR availableGENE3D3.30.160.60coord: 345..357
e-value: 1.9E-7
score: 30.5
NoneNo IPR availableGENE3D3.30.160.60coord: 305..324
e-value: 3.3E-13
score: 49.1
NoneNo IPR availableGENE3D3.30.160.60coord: 510..568
e-value: 4.2E-5
score: 23.3
coord: 1178..1226
e-value: 7.7E-4
score: 19.3
coord: 609..657
e-value: 0.0021
score: 17.8
coord: 569..608
e-value: 1.5E-5
score: 24.8
coord: 381..408
e-value: 2.3E-8
score: 33.8
coord: 409..489
e-value: 4.5E-4
score: 20.0
coord: 889..931
e-value: 1.9E-6
score: 27.6
NoneNo IPR availableGENE3D3.30.160.60coord: 215..242
e-value: 2.0E-7
score: 30.4
coord: 358..380
e-value: 1.4E-12
score: 46.9
NoneNo IPR availableGENE3D3.30.60.60coord: 126..177
e-value: 0.0031
score: 17.2
NoneNo IPR availablePFAMPF13894zf-C2H2_4coord: 228..250
e-value: 0.0011
score: 19.5
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 284..306
e-value: 0.0069
score: 16.7
coord: 598..621
e-value: 0.016
score: 15.5
coord: 368..390
e-value: 2.1E-4
score: 21.5
coord: 257..278
e-value: 9.8E-4
score: 19.4
coord: 312..334
e-value: 4.0E-4
score: 20.6
coord: 171..193
e-value: 0.019
score: 15.3
NoneNo IPR availableGENE3D3.30.160.60coord: 932..1012
e-value: 8.0E-4
score: 19.0
NoneNo IPR availableGENE3D3.30.160.60coord: 198..214
e-value: 4.2E-7
score: 29.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1280..1299
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 136..163
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 199..221
e-value: 1.0
score: 18.4
coord: 646..668
e-value: 0.079
score: 22.1
coord: 1000..1022
e-value: 0.11
score: 21.7
coord: 228..250
e-value: 0.04
score: 23.1
coord: 512..535
e-value: 0.22
score: 20.6
coord: 1203..1226
e-value: 0.84
score: 18.7
coord: 256..278
e-value: 0.0048
score: 26.1
coord: 598..621
e-value: 0.021
score: 24.0
coord: 921..944
e-value: 0.049
score: 22.8
coord: 340..362
e-value: 0.75
score: 18.8
coord: 368..390
e-value: 0.002
score: 27.4
coord: 1163..1186
e-value: 5.3
score: 15.8
coord: 398..420
e-value: 1.9
score: 17.5
coord: 875..898
e-value: 0.073
score: 22.2
coord: 558..581
e-value: 0.024
score: 23.8
coord: 312..334
e-value: 0.0018
score: 27.5
coord: 466..489
e-value: 0.26
score: 20.3
coord: 171..193
e-value: 0.036
score: 23.2
coord: 284..306
e-value: 0.0013
score: 28.0
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 230..250
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 201..222
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 1165..1186
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 173..193
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 258..278
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 600..621
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 468..489
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 560..581
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 648..668
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 314..334
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 342..362
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 877..898
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 514..535
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 370..390
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 923..944
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 286..306
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 1002..1022
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 1205..1226
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 284..311
score: 11.448
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 256..280
score: 10.512
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 875..903
score: 9.702
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 340..367
score: 13.193
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 368..395
score: 12.009
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 171..198
score: 12.674
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 312..339
score: 16.269
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 199..227
score: 11.094
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 228..255
score: 13.505
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 293..349
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 226..278
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 180..237
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 334..386
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 178..197
e-value: 1.4E-6
score: 27.7

Blast
BLAST of TCONS_00012640-protein vs. Swiss-Prot (Human)
Match: ZFP28 (Zinc finger protein 28 homolog OS=Homo sapiens GN=ZFP28 PE=1 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 7.552e-50
Identity = 124/406 (30.54%), Postives = 180/406 (44.33%), Query Frame = 0
Query:  171 FVCEYCHLPFVSKAKFLRHRRIHTEENPYECVHCHQSFSHHADLRNHRNEHHMTNKAFKCDFCPKSFSSRAELKGHLWRHTGEKNEKCQICGKAFATKGNLKLHVDKHIGVLKHKCPFCPQYFTSHSSLEAHMAKHTGMKAYKCRYCSKSYAQAGQLTSHERIHTGEKPFVCQVCGKGFRLNSTRLAHEKRHSGVRPHICDTCGRSFSMPDHLRRHLKTHQDKLDRLVPCPFCKKKIFSGRNMRKHLVRHRELNLTEEQAKAIASSLKPDRDLNEREAVDDDQRSHVSNRSVRQMIRCIECNEEIKSVRKLFEHMASVHFQRDLTVVERKEIRLKHGLQKLHHCPFCSAFFIDYRVLRSHVLAEHPQRAEAIGFSNRNSEAVNANATYKCPNCSMFFHLKGALDQH 576
            + C  C   F   + F RH+R HT + PYEC+ C ++F  +  L  H   +H   K F C  C K+FS    L  H   HTGEK  KC +C K+F    +L +H   H G   ++C  C + F+ H+SL  H   H+G K +KC+ C K++ Q   L SH RIHTGEKPF C  CGK F ++S    H++ H+G +P+ C  C ++F+   HL +H KTH    ++   C  C K      +   HL++H+ ++  E+  K +       +   +  +    QR H   R       CIEC +  K+   L  H                  R  H  +K + C  C   F   + L  H      QR  +                Y+C  C   F   G L+QH
Sbjct:  448 YKCNECGKAFSDGSSFARHQRCHTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPFECAECGKSFSISSQLATHQRIHTGEKPYECKVCSKAFTQKAHLAQHQKTHTG--EKPYECKECGKAF----SQTTHLIQHQRVHTGEKPYKCMECG----KAFGDNSSCTQHQRLHTGQRP----YECIECGKAFKTKSSLICH------------------RRSHTGEKPYECSVCGKAFSHRQSLSVH------QRIHS------------GKKPYECKECRKTFIQIGHLNQH 803          

HSP 2 Score: 157.918 bits (398), Expect = 4.444e-39
Identity = 84/220 (38.18%), Postives = 115/220 (52.27%), Query Frame = 0
Query:  171 FVCEYCHLPFVSKAKFLRHRRIHTEENPYECVHCHQSFSHHADLRNHRNEHHMTNKAFKCDFCPKSFSSRAELKGHLWRHTGEKNEKCQICGKAFATKGNLKLHVDKHIGVLKHKCPFCPQYFTSHSSLEAHMAKHTGMKAYKCRYCSKSYAQAGQLTSHERIHTGEKPFVCQVCGKGFRLNSTRLAHEKRHSGVRPHICDTCGRSFSMPDHLRRHLKTH 390
            F C+ C   F        H RIHT E P+EC  C +SFS  + L  H+  H    K ++C  C K+F+ +A L  H   HTGEK  +C+ CGKAF+   +L  H   H G   +KC  C + F  +SS   H   HTG + Y+C  C K++     L  H R HTGEKP+ C VCGK F    +   H++ HSG +P+ C  C ++F    HL +H + H
Sbjct:  589 FKCKECGKAFRQNIHLASHLRIHTGEKPFECAECGKSFSISSQLATHQRIH-TGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPYECKECRKTFIQIGHLNQHKRVH 807          

HSP 3 Score: 136.346 bits (342), Expect = 2.459e-32
Identity = 79/220 (35.91%), Postives = 110/220 (50.00%), Query Frame = 0
Query:  171 FVCEYCHLPFVSKAKFLRHRRIHTEENPYECVHCHQSFSHHADLRNHRNEHHMTNKAFKCDFCPKSFSSRAELKGHLWRHTGEKNEKCQICGKAFATKGNLKLHVDKHIGVLKHKCPFCPQYFTSHSSLEAHMAKHTGMKAYKCRYCSKSYAQAGQLTSHERIHTGEKPFVCQVCGKGFRLNSTRLAHEKRHSGVRPHICDTCGRSFSMPDHLRRHLKTH 390
            F C  C   F   ++   H+RIHT E PYEC  C ++F+  A L  H+   H   K ++C  C K+FS    L  H   HTGEK  KC  CGKAF    +   H   H G   ++C  C + F + SSL  H   HTG K Y+C  C K+++    L+ H+RIH+G+KP+ C+ C K F        H++ H+G R +      + F    HL  H + H
Sbjct:  617 FECAECGKSFSISSQLATHQRIHTGEKPYECKVCSKAFTQKAHLAQHQKT-HTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSYNYKKSRKVFRQTAHLAHHQRIH 835          

HSP 4 Score: 83.5741 bits (205), Expect = 4.148e-16
Identity = 83/283 (29.33%), Postives = 116/283 (40.99%), Query Frame = 0
Query:  306 HTGMKAYKCRYCSKSYAQAGQLTSHERIHTGEKPFVCQVCGKGFRLNSTRLAHEKRHSGVRPHICDTCGRSFSMPDHLRRHLKTHQDKLDRLVPCPFCKKKIFSGRNMRKH--LVRHRELNLTEEQAKAIASSLKPDRDLNEREAVDDDQRSHVSNRSVRQMIRCIECNEEIKSVRKLFEHMASVHFQRDLTVVERKEIRLKHGLQKLHHCPFCSAFFIDYRVLRSHV---LAEHPQRAEAIG--FSNRNSEAVN-----ANATYKCPNCSMFFHLKGALDQH 576
            + G K +KC  C K++ Q+  LT H+RIHTGEKP+ C  CGK F   S+   H++ H+G +P+ C  CG++F     L RH + +    ++   C  C      G+    H  L +HR ++  E+  K                 V      + S+ +V Q I   E   E    RK F H AS      LT  +R      H  +K   C  C   F     L SH+     E P      G  FS  +  A +         Y+C  CS  F  K  L QH
Sbjct:  414 YAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPYKCNECGKAFSDGSSFARHQRCHTGKKPYECIECGKAFIQNTSLIRHWRYYHTG-EKPFDCIDC------GKAFSDHIGLNQHRRIHTGEKPYKC---------------DVCHKSFRYGSSLTVHQRIHTGEKPYECDVCRKAFSHHAS------LTQHQR-----VHSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPFECAECGKSFSISSQLATHQRIHTGEKPYECKVCSKAFTQKAHLAQH 663          
The following BLAST results are available for this feature:
BLAST of TCONS_00012640-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZFP287.552e-5030.54Zinc finger protein 28 homolog OS=Homo sapiens GN=... [more]
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