TCONS_00012636-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00012636-protein
Unique Name	TCONS_00012636-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	536

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00012636-protein ID=TCONS_00012636-protein|Name=TCONS_00012636-protein|organism=Clytia hemisphaerica|type=polypeptide|length=536bp
MDGTGGGSFSYLLETTKSKLLVLSSLLGVGAIYYMTKNYLQNGRFFPSWY
EVDRQVEGELEPPPKKRGTVIGGKGHIVIKEEIDSGGSLKPTKYHKQRSR
RGSVSSRRSMKSNKSTRLAVIPGSEGRDVNLNKAIIEFDKSLIEVESLLN
FKNEYNRTNHRSNEVIEEGIERLRKLLNYSQDLSLIQTQTTEYLDKQIQT
QTLDDELLQICDAQALEGTNYNDVLDTVYNNRFGEVDSDYDSDNDSFASA
AESVDLEVTEEEVQDYVTFQKKLKDLISKYNQEDFLMYGIEYLTNYGVPI
RSVRTELVHCENDVDFSVKVFCLRRAFKHMLKNSECKEWFVKSGKEMLTT
LLKKANYDHMQFGIDYDEMVRYCEDSQNWAFIDEELGQRGVCSMNFYDVI
LDFMIMDSLEDLQNPPSSVTAAIQNRWLSQSIKKTALSTAIWTVIQSKKR
MLQNPDGFYSRFYDVSMHLTPLLAWGFLGPVKELNDVCFSFKDSMLGFMK
DIFSSQTVSYKSMQTLAEDIFRVANERKDQLLTALS

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_007086	XLOC_007086	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00012636	TCONS_00012636	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019392	Miga

Vocabulary: **Biological Process**
Term	Definition
GO:0008053	mitochondrial fusion

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008053	mitochondrial fusion

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019392	Mitoguardin	PFAM	PF10265	Miga	coord: 109..534 e-value: 1.0E-106 score: 358.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..116

Blast

[Close]

BLAST of TCONS_00012636-protein vs. Swiss-Prot (Human)
Match: MIGA2 (Mitoguardin 2 OS=Homo sapiens GN=MIGA2 PE=1 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.392e-70
Identity = 106/235 (45.11%), Postives = 163/235 (69.36%), Query Frame = 0

Query:  298 VPIRSVRTELVHCENDVDFSVKVFCLRRAFKHMLKNSECKEWFVKSGKEMLTTLLKKANYDHMQFGIDYDEMVRYCEDSQNWAFIDEELGQRGVCSMNFYDVILDFMIMDSLEDLQNPPSSVTAAIQNRWLSQSIKKTALSTAIWTVIQSKKRMLQNPDGFYSRFYDVSMHLTPLLAWGFLGPVKELNDVCFSFKDSMLGFMKDIFSSQTVSYKSMQTLAEDIFRVANERKDQLL 532
            VP R++RTEL+ C +D DF  K+ C+R+AF+ +L++   + +F K G++M+T L+ KA      F   Y+EM+ Y    + WA    EL  RGV  M+F+D++LDF++MD+ EDL+NPP+SV A ++NRWLS S K+TAL+TA W+V+++K+R+L  PDGF S FY VS H++P+LA+GFLGP  +L +VC  FK  ++ +++D+F    V Y S+  LA+DI +++  R + LL
Sbjct:  331 VPCRTLRTELLGCYSDQDFLAKLHCVRQAFEGLLEDKSNQLFFGKVGRQMVTGLMTKAEKSPKGFLESYEEMLSYALRPETWATTRLELEGRGVVCMSFFDIVLDFILMDAFEDLENPPASVLAVLRNRWLSDSFKETALATACWSVLKAKRRLLMVPDGFISHFYSVSEHVSPVLAFGFLGPKPQLAEVCAFFKHQIVQYLRDMFDLDNVRYTSLPALADDILQLSRRRSEILL 565

The following BLAST results are available for this feature:

BLAST of TCONS_00012636-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00012636-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MIGA2	1.392e-70	45.11	Mitoguardin 2 OS=Homo sapiens GN=MIGA2 PE=1 SV=1	[more]

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TCONS_00012636-protein (polypeptide) - C. hemisphaerica