TCONS_00012572-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00012572-protein
Unique NameTCONS_00012572-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length539

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00012572-protein ID=TCONS_00012572-protein|Name=TCONS_00012572-protein|organism=Clytia hemisphaerica|type=polypeptide|length=539bp
MAQLSFDEYGRPFIVLRDQDKQERLTGVEALKSHIMAAKTVANTLKTSLG
PKGMDKILVSPDNDVTITNDGATILEKMHVEHEIAKLLVDLSKSQDDEIG
DGTTGVVVLAGALLEHAESLLDKGIHPIRIADGYEQASQIAVAHLDKISD
SFEVNPNNKEPLIETAMTTLGSKIASRCHRQLAEIAVDAILSVADFERRD
VDFELIKMQTKEGGELDDTVLVKGVIVDKDMSHPQMPKQIKDCKLAILTC
PFEPPKPKTKHKLDVTSVEDYQKLREYEKETFVKMIKQVKDTGANLAICQ
WGFDDEANHLLLQNELPAVRWVGGPEIELIAIATGGRIVPRFNELTSDKL
GNAGVVRELTFGTTKDRMLVIEDCKNTRAVTIFIRGGNKMILDEGKRSIH
DALCVIRNLVRDNRIVYGGGAAEIACSLAVSAEADKVASLEQYAMHAFAD
ALENVPNALAENSGLSPIETTSKVKAMQVAQNNPRLGVDCVHAGTNDMKE
QHVIETLHGKRQQITLATQLVRMILKIDDIRKTHGDGRQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007052XLOC_007052Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00012572TCONS_00012572Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017998Chaperone_TCP-1
IPR012718Chap_CCT_epsi
IPR027413GROEL-like_equatorial
IPR027409GroEL-like_apical_dom
IPR002423Cpn60/TCP-1
IPR002194Chaperonin_TCP-1_CS
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0051082unfolded protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
molecular_function GO:0005524 ATP binding
molecular_function GO:0051082 unfolded protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017998Chaperone tailless complex polypeptide 1 (TCP-1)PRINTSPR00304TCOMPLEXTCP1coord: 415..427
score: 49.19
coord: 95..114
score: 54.86
coord: 43..59
score: 45.33
coord: 65..83
score: 39.4
coord: 381..403
score: 35.72
IPR012718T-complex protein 1, epsilon subunitTIGRFAMTIGR02343TIGR02343coord: 4..532
e-value: 5.0E-289
score: 957.3
IPR012718T-complex protein 1, epsilon subunitCDDcd03339TCP1_epsiloncoord: 7..532
e-value: 0.0
score: 1061.52
IPR027413GroEL-like equatorial domainGENE3D1.10.560.10coord: 367..534
e-value: 4.9E-45
score: 153.1
IPR027413GroEL-like equatorial domainGENE3D1.10.560.10coord: 15..237
e-value: 8.2E-62
score: 208.2
IPR027409GroEL-like apical domainGENE3D3.50.7.10coord: 238..366
e-value: 2.9E-60
score: 202.3
IPR027409GroEL-like apical domainSUPERFAMILY52029GroEL apical domain-likecoord: 218..386
IPR002423Chaperonin Cpn60/TCP-1 familyPFAMPF00118Cpn60_TCP1coord: 41..530
e-value: 4.4E-157
score: 523.6
IPR002194Chaperonin TCP-1, conserved sitePROSITEPS00750TCP1_1coord: 46..58
IPR002194Chaperonin TCP-1, conserved sitePROSITEPS00995TCP1_3coord: 95..103
NoneNo IPR availableSUPERFAMILY48592GroEL equatorial domain-likecoord: 413..530
coord: 22..152
NoneNo IPR availableSUPERFAMILY54849GroEL-intermediate domain likecoord: 158..224
coord: 379..414

Blast
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BLAST of TCONS_00012572-protein vs. Swiss-Prot (Human)
Match: TCPE (T-complex protein 1 subunit epsilon OS=Homo sapiens GN=CCT5 PE=1 SV=1)

HSP 1 Score: 869.381 bits (2245), Expect = 0.000e+0
Identity = 403/532 (75.75%), Postives = 482/532 (90.60%), Query Frame = 0 
Query:    1 MAQLSFDEYGRPFIVLRDQDKQERLTGVEALKSHIMAAKTVANTLKTSLGPKGMDKILVSPDNDVTITNDGATILEKMHVEHEIAKLLVDLSKSQDDEIGDGTTGVVVLAGALLEHAESLLDKGIHPIRIADGYEQASQIAVAHLDKISDSFEVNPNNKEPLIETAMTTLGSKIASRCHRQLAEIAVDAILSVADFERRDVDFELIKMQTKEGGELDDTVLVKGVIVDKDMSHPQMPKQIKDCKLAILTCPFEPPKPKTKHKLDVTSVEDYQKLREYEKETFVKMIKQVKDTGANLAICQWGFDDEANHLLLQNELPAVRWVGGPEIELIAIATGGRIVPRFNELTSDKLGNAGVVRELTFGTTKDRMLVIEDCKNTRAVTIFIRGGNKMILDEGKRSIHDALCVIRNLVRDNRIVYGGGAAEIACSLAVSAEADKVASLEQYAMHAFADALENVPNALAENSGLSPIETTSKVKAMQVAQNNPRLGVDCVHAGTNDMKEQHVIETLHGKRQQITLATQLVRMILKIDDIRK 532
            M  L+FDEYGRPF++++DQD++ RL G+EALKSHIMAAK VANT++TSLGP G+DK++V  D DVT+TNDGATIL  M V+H+IAKL+V+LSKSQDDEIGDGTTGVVVLAGALLE AE LLD+GIHPIRIADGYEQA+++A+ HLDKISDS  V+  + EPLI+TA TTLGSK+ + CHRQ+AEIAV+A+L+VAD ERRDVDFELIK++ K GG L+DT L+KGVIVDKD SHPQMPK+++D K+AILTCPFEPPKPKTKHKLDVTSVEDY+ L++YEKE F +MI+Q+K+TGANLAICQWGFDDEANHLLLQN LPAVRWVGGPEIELIAIATGGRIVPRF+ELT++KLG AG+V+E++FGTTKD+MLVIE CKN+RAVTIFIRGGNKMI++E KRS+HDALCVIRNL+RDNR+VYGGGAAEI+C+LAVS EADK  +LEQYAM AFADALE +P AL+ENSG++PI+T ++V+A QV + NP LG+DC+H GTNDMK+QHVIETL GK+QQI+LATQ+VRMILKIDDIRK
Sbjct:    4 MGTLAFDEYGRPFLIIKDQDRKSRLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARVAIEHLDKISDSVLVDIKDTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMERRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKKVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDYKALQKYEKEKFEEMIQQIKETGANLAICQWGFDDEANHLLLQNNLPAVRWVGGPEIELIAIATGGRIVPRFSELTAEKLGFAGLVQEISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALSENSGMNPIQTMTEVRARQVKEMNPALGIDCLHKGTNDMKQQHVIETLIGKKQQISLATQMVRMILKIDDIRK 535
The following BLAST results are available for this feature:
BLAST of TCONS_00012572-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TCPE0.000e+075.75T-complex protein 1 subunit epsilon OS=Homo sapien... [more]
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