TCONS_00012567-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00012567-protein
Unique NameTCONS_00012567-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length317

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00012567-protein ID=TCONS_00012567-protein|Name=TCONS_00012567-protein|organism=Clytia hemisphaerica|type=polypeptide|length=317bp
TKMALAVEENFEPKQFQLGTLITIKVTADDYGYCPQRNEGILEALNNGIV
NSVSVLVNAAFVDPIPLKCCLKTAVKKLKLGLHLNLTEGRPVTALDSVKT
LLDHDNEFFPKALFQEHLKLFSKTQIYQEIKNQIVLFNEIFGKNPDYIDG
HQHCHIFPIITEELVKCMDEFDIQETRIPHEIVDLVDLKRNGCITENQEY
FFQTVLENCITAKSIFDKREIRYPHYFIGLSTMSKSMTESSMRQAINIIK
DNLRKNQPFEWTNKGDMFVELMAHPGFPCVTKDAGCSVKGPDDFAKSHDR
LYELNFLKSQTAFKLLY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007048XLOC_007048Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00012567TCONS_00012567Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006879YdjC-like
IPR011330Glyco_hydro/deAcase_b/a-brl
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
molecular_function GO:0003824 catalytic activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.20.20.370coord: 22..317
e-value: 2.9E-57
score: 193.8
IPR006879Carbohydrate deacetylase YdjC-likePFAMPF04794YdjCcoord: 25..314
e-value: 4.3E-53
score: 180.6
IPR011330Glycoside hydrolase/deacetylase, beta/alpha-barrelSUPERFAMILY88713Glycoside hydrolase/deacetylasecoord: 24..184
coord: 212..314

Blast
[Close]
BLAST of TCONS_00012567-protein vs. Swiss-Prot (Human)
Match: YDJC (Carbohydrate deacetylase OS=Homo sapiens GN=YDJC PE=1 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 1.268e-48
Identity = 97/296 (32.77%), Postives = 148/296 (50.00%), Query Frame = 0 
Query:   22 ITIKVTADDYGYCPQRNEGILEALNNGIVNSVSVLVNAAFVDPIPLKCCLKTAVKKLKLGLHLNLTEGRPVT-ALDSVKTLLDHDNEFFPKALFQEHLKL--FSKTQIYQEIKNQIVLFNEIFGKNPDYIDGHQHCHIFPIITEELVKCMDEFDIQETRIPHEIVDLVDLKRNGC--ITENQEYFFQTVLENCITAKSIFDKREIRYPHYFIGLSTMSKSMTESSMRQAINIIKDNLRKNQPFEWTNKG-DMFVELMAHPGFPCVTKDAGCSVKGPDDFAKSHDRLYELNFLKSQT 311
            + + VTADD+GYCP+R+EGI+EA   G V SVS+LVN A  +              +  GLH NL+EGRPV  A     +LL  +  F  K  F+E +        Q+ +E++ Q+  F E+ G+ P + DGHQH H+ P + +   + +  + ++ TR+P      ++    GC  +      F   V  +   A   F +  +R+   F+GLST  + M+   +  A+  +          E T  G  +  ELMAHPG+P V    GC  +GPD F+ S +RL+EL  L + T
Sbjct:    6 MRLVVTADDFGYCPRRDEGIVEAFLAGAVTSVSLLVNGAATE----SAAELARRHSIPTGLHANLSEGRPVGPARRGASSLLGPEGFFLGKMGFREAVAAGDVDLPQVREELEAQLSCFRELLGRAPTHADGHQHVHVLPGVCQVFAEALQAYGVRFTRLP------LERGVGGCTWLEAPARAFACAVERDARAAVGPFSRHGLRWTDAFVGLSTCGRHMSAHRVSGALARV---------LEGTLAGHTLTAELMAHPGYPSVPPTGGCG-EGPDAFSCSWERLHELRVLTAPT 281
The following BLAST results are available for this feature:
BLAST of TCONS_00012567-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
YDJC1.268e-4832.77Carbohydrate deacetylase OS=Homo sapiens GN=YDJC P... [more]
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