TCONS_00012536-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00012536-protein
Unique NameTCONS_00012536-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length415

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00012536-protein ID=TCONS_00012536-protein|Name=TCONS_00012536-protein|organism=Clytia hemisphaerica|type=polypeptide|length=415bp
MARISYATDFEKSVLVNNFEKRGWNHVNPEDEWHFYWASVGTVRQIFNIE
NGYRLNENQVVNHFPNHYELTRKDSMLKNLKRYRKELEKEGNPFAEKDDN
GKYTYLDFVPTTFLLPGDYNLFVEEFRKNPSSTWIMKPAARSQGVGIFLI
NRISQIKKWSKDGKSGNVPHSSKDSYVISRYIDNPLLIGGKKFDLRLYVL
VTSYRPLKCYMYKLGFCRFCTVKYNADVNELDNMFVHLTNVSIQKHGDEY
NSTHGGKWTIENLRLYLEGTRGHEVTNKLFDDIHWLIVHSLKSVSGVMVN
DRHCYEVYGYDIIIDDFLKPWIIEVNASPSLSATTSADRIMKFSLVNDVI
NIVVPPGEFPDVRREKIPKKEHLGNFDVLLDEEVAGLDGSGSDRSGKGKS
KLTNKDNRMQRATWK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007035XLOC_007035Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00012536TCONS_00012536Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004344TTL/TTLL_fam
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006464 cellular protein modification process
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 70..90
NoneNo IPR availableGENE3D3.30.470.20coord: 109..407
e-value: 2.6E-27
score: 95.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 386..415
NoneNo IPR availableSUPERFAMILY56059Glutathione synthetase ATP-binding domain-likecoord: 278..354
coord: 108..217
IPR004344Tubulin-tyrosine ligase/Tubulin polyglutamylasePFAMPF03133TTLcoord: 58..358
e-value: 3.6E-104
score: 347.9
IPR004344Tubulin-tyrosine ligase/Tubulin polyglutamylasePROSITEPS51221TTLcoord: 1..365
score: 51.504

Blast
[Close]
BLAST of TCONS_00012536-protein vs. Swiss-Prot (Human)
Match: TTLL1 (Probable tubulin polyglutamylase TTLL1 OS=Homo sapiens GN=TTLL1 PE=2 SV=1)

HSP 1 Score: 600.897 bits (1548), Expect = 0.000e+0
Identity = 274/401 (68.33%), Postives = 342/401 (85.29%), Query Frame = 0 
Query:    2 ARISYATDFEKSVLVNNFEKRGWNHVNPEDEWHFYWASVGTVRQIFNIENGYRLNENQVVNHFPNHYELTRKDSMLKNLKRYRKELEKEGNPFAEKDDNGKYTYLDFVPTTFLLPGDYNLFVEEFRKNPSSTWIMKPAARSQGVGIFLINRISQIKKWSKDGKSGN-VPHSSKDSYVISRYIDNPLLIGGKKFDLRLYVLVTSYRPLKCYMYKLGFCRFCTVKYNADVNELDNMFVHLTNVSIQKHGDEYNSTHGGKWTIENLRLYLEGTRGHEVTNKLFDDIHWLIVHSLKSVSGVMVNDRHCYEVYGYDIIIDDFLKPWIIEVNASPSLSATTSADRIMKFSLVNDVINIVVPPGEFPDVRREKIPKKEHLGNFDVLLDEEVAGLDGSGSD-RSGKGKS 400
             ++ + TD EKSVL+NNFEKRGW  V   ++W+FYW SV T+R +F++E GYRL+++Q+VNHFPNHYELTRKD M+KN+KRYRKELEKEG+P AEKD+NGKY YLDFVP T++LP DYNLFVEEFRK+PSSTWIMKP  ++QG GIFLIN++SQIKKWS+D K+ + V  S+K++YVIS YI+NPLLIGG+KFDLRLYVLV++YRPL+CYMYKLGFCRFCTVKY    +ELDNMFVHLTNV+IQKHG++YN  HGGKWT+ NLRLYLE TRG EVT+KLFD+IHW+IV SLK+V+ VM ND+HC+E YGYDIIIDD LKPW+IEVNASPSL+++T+ DRI+K++L+ND +NI VP GE PD +  K P KE LGN+++L DEE+A  DG+  + RS +G+S
Sbjct:    3 GKVKWVTDIEKSVLINNFEKRGWVQVTENEDWNFYWMSVQTIRNVFSVEAGYRLSDDQIVNHFPNHYELTRKDLMVKNIKRYRKELEKEGSPLAEKDENGKYLYLDFVPVTYMLPADYNLFVEEFRKSPSSTWIMKPCGKAQGKGIFLINKLSQIKKWSRDSKTSSFVSQSNKEAYVISLYINNPLLIGGRKFDLRLYVLVSTYRPLRCYMYKLGFCRFCTVKYTPSTSELDNMFVHLTNVAIQKHGEDYNHIHGGKWTVSNLRLYLESTRGKEVTSKLFDEIHWIIVQSLKAVAPVMNNDKHCFECYGYDIIIDDKLKPWLIEVNASPSLTSSTANDRILKYNLINDTLNIAVPNGEIPDCKWNKSPPKEVLGNYEILYDEELAQGDGADRELRSRQGQS 403
The following BLAST results are available for this feature:
BLAST of TCONS_00012536-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TTLL10.000e+068.33Probable tubulin polyglutamylase TTLL1 OS=Homo sap... [more]
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