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Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00012439-protein ID=TCONS_00012439-protein|Name=TCONS_00012439-protein|organism=Clytia hemisphaerica|type=polypeptide|length=297bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00012439-protein vs. Swiss-Prot (Human)
Match: ZN235 (Zinc finger protein 235 OS=Homo sapiens GN=ZNF235 PE=2 SV=3) HSP 1 Score: 144.05 bits (362), Expect = 1.045e-38 Identity = 105/272 (38.60%), Postives = 127/272 (46.69%), Query Frame = 0
Query: 11 KRYKCSSCDKAFEYPSGLTRHLRSHTGEKPFSCLICNKEYSQASHLQKHEKSHFGNPTEKHFKCQLCHKTFYYPSELHKHINTHDKMDKPYPCNICPKRFKFSSALQRHMRSHTPS--FEGPRCDKRFEQANHLGEHNCGGKKELVQPVDCISNFESNPVDT-GTCFSIETLQKSSCNPHDETPRERRIISTDKPTITQYFSSGMNPKHEDPNIKSENPKTHKCTVCQKEFQYMSGLQRHLRVHTGEKPFACQICGKTFSQAPHVRKHLLTH 279
K YKC C K F S H R HTGEKPF C +C K +SQ+S+ Q H++ H G EK +KC++C K F + LH H H +KPY C C K F +S LQ H HT F+ C KRF QA+HL H E +P C DT G FS Q+S+ H +II T + K KC C KEF + +GL H RVHTGEKP+ CQ CGK FSQA H H H
Sbjct: 485 KPYKCEECGKGFSSASSFQSHQRVHTGEKPFRCNVCGKGFSQSSYFQAHQRVHTG---EKPYKCEVCGKRFNWSLNLHNHQRVHTG-EKPYKCEECGKGFSQASNLQAHQSVHTGEKPFKCDACQKRFSQASHLQAHQRVHTGE--KPYKC---------DTCGKAFS----QRSNLQVH-------QIIHTGE-------------------------KPFKCEECGKEFSWSAGLSAHQRVHTGEKPYTCQQCGKGFSQASHFHTHQRVH 705 HSP 2 Score: 133.265 bits (334), Expect = 6.419e-35 Identity = 105/289 (36.33%), Postives = 135/289 (46.71%), Query Frame = 0
Query: 11 KRYKCSSCDKAFEYPSGLTRHLRSHTGEKPFSCLICNKEYSQASHLQKHEKSHFGNPTEKHFKCQLCHKTFYYPSELHKHINTHDKMDKPYPCNICPKRFKFSSALQRHMRSHTPS--FEGPRCDKRFEQANHLGEHNCGGKKELVQPVDC---------ISNFESNP-VDTG----TCFSIETLQKSSCNPHDETPRERRIISTDKP----TITQYFSSGMNPKHEDPNIKSENPKTHKCTVCQKEFQYMSGLQRHLRVHTGEKPFACQICGKTFSQAPHVRKHLLTH 279
K Y+C SC K F + L H R HTGEKP+ C +C K ++Q SHLQ HE+ H G EK +KC C K F S LH H H + +KPY C+ C K F S L H R HT ++ C K F A+ H E +P C S F+++ V TG C S N H+ +R+ + +KP + FS N + E P KC CQK F S LQ H RVHTGEKP+ C CGK FSQ +++ H + H
Sbjct: 373 KPYRCDSCGKGFSRSTDLNIHCRVHTGEKPYKCEVCGKGFTQRSHLQAHERIHTG---EKPYKCGDCGKRFSCSSNLHTHQRVHTE-EKPYKCDECGKCFSLSFNLHSHQRVHTGEKPYKCEECGKGFSSASSFQSHQRVHTGE--KPFRCNVCGKGFSQSSYFQAHQRVHTGEKPYKCEVCGKRFNWSLNLHN----HQRVHTGEKPYKCEECGKGFSQASNLQAHQSVHTGEKP--FKCDACQKRFSQASHLQAHQRVHTGEKPYKCDTCGKAFSQRSNLQVHQIIH 649 HSP 3 Score: 128.257 bits (321), Expect = 3.852e-33 Identity = 97/281 (34.52%), Postives = 136/281 (48.40%), Query Frame = 0
Query: 5 AIKQPIKRYKCSSCDKAFEYPSGLTRHLRSHTGEKPFSCLICNKEYSQASHLQKHEKSHFGNPTEKHFKCQLCHKTFYYPSELHKHINTHDKMDKPYPCNICPKRFKFSSALQRHMRSHTPS--FEGPRCDKRFEQANHLGEHNCGGKKELVQPVDCISNFESNPVDTGTCFSIETLQKSSCNPHDETPRERRIISTDKP----TITQYFSSGMNPKHEDPNIKSENPKTHKCTVCQKEFQYMSGLQRHLRVHTGEKPFACQICGKTFSQAPHVRKHLLTH 279
+++ KRY C C K F S L H R HTGEKP++C C K ++Q+SHL H H G EK ++C C K F ++L+ H H +KPY C +C K F S LQ H R HT ++ C KRF +++L H +E +P C + G CFS+ S N H +R+ + +KP + FSS + + E P +C VC K F S Q H RVHTGEKP+ C++CGK F+ + ++ H H
Sbjct: 311 SVRTGKKRYWCHECGKGFSQSSNLQTHQRVHTGEKPYTCHECGKSFNQSSHLYAHLPIHTG---EKPYRCDSCGKGFSRSTDLNIHCRVHTG-EKPYKCEVCGKGFTQRSHLQAHERIHTGEKPYKCGDCGKRFSCSSNLHTHQRVHTEE--KPYKCD--------ECGKCFSL------SFNLHS----HQRVHTGEKPYKCEECGKGFSSASSFQSHQRVHTGEKP--FRCNVCGKGFSQSSYFQAHQRVHTGEKPYKCEVCGKRFNWSLNLHNHQRVH 565 HSP 4 Score: 111.309 bits (277), Expect = 2.237e-27 Identity = 91/271 (33.58%), Postives = 127/271 (46.86%), Query Frame = 0
Query: 15 CSSCDKAFEYPSGLTRHLRSHTGEKPFSCLICNKEYSQASHLQKHEKSHFGNPTEKHFKCQLCHKTFYYPSELHKHINTHDKMDKPYPCNICPKRFKFSSALQRHMRSHTPS--FEGPRCDKRFEQANHLGEHNCGGKKELVQPVDCISNFESNPVDTGTCFSIETLQKSSCNPHDETPRERRIISTDKP----TITQYFSSGMNPKHEDPNIKSENPKTHKCTVCQKEFQYMSGLQRHLRVHTGEKPFACQICGKTFSQAPHVRKHLLTH 279
CS+ +K Y SG+ TG+K + C C K +SQ+S+LQ H++ H G EK + C C K+F S L+ H+ H +KPY C+ C K F S+ L H R HT ++ C K F Q +HL H E + + P G C ++ SC+ + T +R+ + +KP + FS N E P +KC C K F S Q H RVHTGEKPF C +CGK FSQ+ + + H H
Sbjct: 293 CSTHEKDTSYSSGIPVQQSVRTGKKRYWCHECGKGFSQSSNLQTHQRVHTG---EKPYTCHECGKSFNQSSHLYAHLPIHTG-EKPYRCDSCGKGFSRSTDLNIHCRVHTGEKPYKCEVCGKGFTQRSHLQAH------ERIHTGE-------KPYKCGDCG-----KRFSCSSNLHT--HQRVHTEEKPYKCDECGKCFSLSFNLHSHQRVHTGEKP--YKCEECGKGFSSASSFQSHQRVHTGEKPFRCNVCGKGFSQSSYFQAHQRVH 537 HSP 5 Score: 84.3445 bits (207), Expect = 3.456e-18 Identity = 50/114 (43.86%), Postives = 61/114 (53.51%), Query Frame = 0
Query: 11 KRYKCSSCDKAFEYPSGLTRHLRSHTGEKPFSCLICNKEYSQASHLQKHEKSHFGNPTEKHFKCQLCHKTFYYPSELHKHINTHDKMDKPYPCNICPKRFKFSSALQRHMRSHT 124
K YKC +C KAF S L H HTGEKPF C C KE+S ++ L H++ H G EK + CQ C K F S H H H ++PY C++C K F S L H R HT
Sbjct: 625 KPYKCDTCGKAFSQRSNLQVHQIIHTGEKPFKCEECGKEFSWSAGLSAHQRVHTG---EKPYTCQQCGKGFSQASHFHTHQRVHTG-ERPYICDVCCKGFSQRSHLIYHQRVHT 734 The following BLAST results are available for this feature:
BLAST of TCONS_00012439-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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