TCONS_00012432-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00012432-protein
Unique Name	TCONS_00012432-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	445

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00012432-protein ID=TCONS_00012432-protein|Name=TCONS_00012432-protein|organism=Clytia hemisphaerica|type=polypeptide|length=445bp
MKNKGKTEEMKALKSRHGTASMILKWTLTILFSTVVRWLLIYFDFGEVFK
RRVEISSPITSWFRVEECITLSQLGLSPYSGDVCHQPPLIVEIFKLLPSK
WTVPFFVMADLATGIMLSKLCQCYTASQLSAQDSEKKEYATDTKSNWIKE
NSIVHFIVLNLYLLNPFTILTCVAQSTNVINNFVISLLLFSMSKGYWSMA
SICVAFVSYISLYPIMLIVPVILSVKKGANGNMLKIFACLTWFFLTMFAL
LYGSYVANHSWDFIDAVYGFILQAPDLTPNMGLFWYFFLEMFDHFRLFFL
VVYQINVFIYALPLAIVFRNRPMILSYALLSLMVLFQSYSNMGNLSLPFA
LIPLWSHLYPYMRNFLLIAGMFFFTSLLAPSMWYLWIYAGMGNANFFYAV
TLAYNTAQVFLLSDVLYAFLRHQFHLKNGLSPKTKDGKEGIVIMK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_006981	XLOC_006981	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00012432	TCONS_00012432	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR009600	PIG-U

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane
GO:0042765	GPI-anchor transamidase complex

Vocabulary: **Biological Process**
Term	Definition
GO:0016255	attachment of GPI anchor to protein

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016255	attachment of GPI anchor to protein
cellular_component	GO:0042765	GPI-anchor transamidase complex
cellular_component	GO:0016021	integral component of membrane

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009600	GPI transamidase subunit PIG-U	PFAM	PF06728	PIG-U	coord: 33..404 e-value: 5.9E-99 score: 331.6

Blast

[Close]

BLAST of TCONS_00012432-protein vs. Swiss-Prot (Human)
Match: PIGU (Phosphatidylinositol glycan anchor biosynthesis class U protein OS=Homo sapiens GN=PIGU PE=1 SV=3)

HSP 1 Score: 311.227 bits (796), Expect = 2.976e-102
Identity = 173/414 (41.79%), Postives = 254/414 (61.35%), Query Frame = 0

Query:   46 GEVFKRRVEISSPITSWFRVEECITLSQLGLSPYSGDVCHQPPLIVEIFKLLPSKWTVPFFVMADLATGIMLSKLCQCYTASQLSAQDS--EKKEYATDTKSNWIKENSIVHFIVLNL---YLLNPFTILTCVAQSTNVINNFVISLLLFSMSKGYWSMASICVAFVSYISLYPIMLIVPVILSVKKGANGNMLKIFACLTWFFLTMFALLY-GSYVAN--------HSWDFIDAVYGFILQAPDLTPNMGLFWYFFLEMFDHFRLFFLVVYQINVFIYALPLAIVFRNRPMILSYALLSLMVLFQSYSNMGNLSLPFALIPLWSHLYPYMRNFLLIAGMFFFTSLLAPSMWYLWIYAGMGNANFFYAVTLAYNTAQVFLLSDVLYAFLRHQFHLKNGLSPKTKDGKEGIVIMK 445
             E    RVE+ SP++SW RV E ++L  LG+SPYSG V H+ PLI+ +F  L   +    F++ D  T I L    Q +       Q    E  +YA D  +  I+    + +I L +   YLLNP+TIL+CVA+ST  INN +I+  + +  KG   +++I +A  +Y SLYP+ L VP +L + +     + K+ +   W F   +A++Y GS V           SWDFI AVYGFIL  PDLTPN+GLFWYFF EMF+HF LFF+ V+QINVF Y +PLAI  +  P+   +  ++++ +F+SY  +G+++L  A  P+W+HLY ++RN  ++  +    SLL P +W+LWIYAG  N+NFFYA+TL +N  Q+ L+SD  YAFLR +++L +GL    KDG E ++++K
Sbjct:   25 AEFISERVEVVSPLSSWKRVVEGLSLLDLGVSPYSGAVFHETPLIIYLFHFL-IDYAELVFMITDALTAIALYFAIQDFNKVVFKKQKLLLELDQYAPDV-AELIRTPMEMRYIPLKVALFYLLNPYTILSCVAKSTCAINNTLIAFFILTTIKGSAFLSAIFLALATYQSLYPLTLFVPGLLYLLQRQYIPV-KMKSKAFWIFSWEYAMMYVGSLVVIICLSFFLLSSWDFIPAVYGFILSVPDLTPNIGLFWYFFAEMFEHFSLFFVCVFQINVFFYTIPLAIKLKEHPIFFMFIQIAVIAIFKSYPTVGDVALYMAFFPVWNHLYRFLRNIFVLTCIIIVCSLLFPVLWHLWIYAGSANSNFFYAITLTFNVGQILLISDYFYAFLRREYYLTHGLYLTAKDGTEAMLVLK 435

The following BLAST results are available for this feature:

BLAST of TCONS_00012432-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00012432-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
PIGU	2.976e-102	41.79	Phosphatidylinositol glycan anchor biosynthesis cl...	[more]

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TCONS_00012432-protein (polypeptide) - C. hemisphaerica