TCONS_00012309-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00012309-protein
Unique Name	TCONS_00012309-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	437

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00012309-protein ID=TCONS_00012309-protein|Name=TCONS_00012309-protein|organism=Clytia hemisphaerica|type=polypeptide|length=437bp
MIVLLIAFIAVLTSYYFWTKNNSSNATGKKQILPPSPPRLPVLGNIHQLI
KQKKTKELHQIITDYSKELGSIFTFWFGDRPVVFINDYHMAKEMLNSCEC
SGRPQRLAGEIVSKNFQGLIVTDELEKVQKRRKIIHNALSFYEKNNLEEN
LQEEADELIETIRKEQKCNQYVSLSQHLSLCANNLFTRLLFNKRCTSIDG
IFATIQKLLDLLMKGLTISNLLEGFPALRKLPVGRFMFLDLYVKGMFGLI
GKEYEQHKSKLPADETNGASDLTDILINEDSNLTRDNIEVLLSDTMVAGI
DTTMSAMKLTVYNLAKYTTEAEICFKEIQGVLDDKKNMTLEESQKCHYLR
AFLHESLRTQDVSPLGVPHRTQRDIEIDGYTIPKNTTIFFNLYAMHNDES
LFEEPHSFKPERFLNTEGEFVQNEKFVGFSIGRRRCI

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_006925	XLOC_006925	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00012309	TCONS_00012309	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001128	Cyt_P450
IPR002401	Cyt_P450_E_grp-I

Vocabulary: **Molecular Function**
Term	Definition
GO:0005506	iron ion binding
GO:0020037	heme binding
GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
molecular_function	GO:0020037	heme binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 144..168
None	No IPR available	GENE3D	1.10.630.10		coord: 25..437 e-value: 9.6E-93 score: 310.8
IPR001128	Cytochrome P450	PRINTS	PR00385	P450	coord: 351..362 score: 35.08 coord: 298..315 score: 32.74 coord: 427..436 score: 47.74
IPR001128	Cytochrome P450	PFAM	PF00067	p450	coord: 34..437 e-value: 7.6E-89 score: 298.5
IPR001128	Cytochrome P450	SUPERFAMILY	48264	Cytochrome P450	coord: 34..437
IPR002401	Cytochrome P450, E-class, group I	PRINTS	PR00463	EP450I	coord: 426..436 score: 50.23 coord: 350..368 score: 36.56 coord: 391..415 score: 39.82 coord: 66..85 score: 35.14 coord: 181..199 score: 21.66 coord: 287..304 score: 31.2

Blast

[Close]

BLAST of TCONS_00012309-protein vs. Swiss-Prot (Human)
Match: CP2A6 (Cytochrome P450 2A6 OS=Homo sapiens GN=CYP2A6 PE=1 SV=3)

HSP 1 Score: 149.058 bits (375), Expect = 8.138e-40
Identity = 119/449 (26.50%), Postives = 208/449 (46.33%), Query Frame = 0

Query:    3 VLLIAFIAVLTSYYFWTKNNSSNATGKKQILPPSPPRLPVLGNIHQLIKQKKTKELHQIITDYSKELGSIFTFWFGDRPVVFINDYHMAKEML--NSCECSGRPQRLAGEIVSKNFQGLIVTDELEKVQKRRKIIHNALSF-YEKNNLEENLQEEADELIETIRKEQKCNQYVSLSQHLSLCANNLFTRLLFNKRCTSIDGIFATIQKLLDLLMKGLTIS--NLLEGFPALRK-LPVGRFMFLDLYVKGMFGLIGKEYEQHKSKLPADETNGASDLTDILI--------NEDSNLTRDNIEVLLSDTMVAGIDTTMSAMKLTVYNLAKYTTEAEICFKEIQGVLDDKKNMTLEESQKCHYLRAFLHESLRTQDVSPLGVPHRTQRDIEIDGYTIPKNTTIFFNLYAMHNDESLFEEPHSFKPERFLNTEGEFVQNEKFVGFSIGRRRCI 437
            +LL+A +  LT     +      + GK   LPP P  LP +GN  QL     T++++  +   S+  G +FT   G R VV +  +   +E L   + E SGR ++   + V K + G++ ++     Q RR  I     F   K  +EE +QEEA  LI+ +R     N  +  +  LS   +N+ + ++F  R    D  F ++ +++  + +  + S   L E F ++ K LP  +     L ++G+   I K+ E ++  L   + N   D  D  +        N ++     N+ +   +  + G +T  + ++     L K+        +EI  V+   +    E+  K  Y+ A +HE  R  DV P+ +  R ++D +   + +PK T +F  L ++  D S F  P  F P+ FLN +G+F +++ FV FSIG+R C 
Sbjct:    6 MLLVALLVCLTVMVLMSVWQQRKSKGK---LPPGPTPLPFIGNYLQL----NTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWVFKGY-GVVFSNGERAKQLRRFSIATLRDFGVGKRGIEERIQEEAGFLIDALRGTGGAN--IDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQL-LQGLEDFIAKKVEHNQRTL---DPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVFPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCF 440

The following BLAST results are available for this feature:

BLAST of TCONS_00012309-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00012309-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CP2A6	8.138e-40	26.50	Cytochrome P450 2A6 OS=Homo sapiens GN=CYP2A6 PE=1...	[more]

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TCONS_00012309-protein (polypeptide) - C. hemisphaerica