TCONS_00012298-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00012298-protein
Unique NameTCONS_00012298-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length291

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00012298-protein ID=TCONS_00012298-protein|Name=TCONS_00012298-protein|organism=Clytia hemisphaerica|type=polypeptide|length=291bp
SRSDRDKYVIIHEENIMPGYEKNFKKRDNVDSRGVAYDRQSIMHYSRTTF
SISRDKPVLTWRQDPKKSLGGAKMTPSDILQLKLMYGCATNPTTTTTTTT
TTPTTTTTTTTTPTTTTTTTTPTTTTTTTTPTTTTTPTTTTTTTTTTPTT
TTPTTTTTPTTTTKTTTTKPTTSTKPTTITKPTRKTKRTTPKTRTKTTKE
GQKECKDTSDRCEDAENNPSLCKNKNYVYYEHCKKTCGLCATKPKTKKEC
KDVSSYCNGATSSRCRQMSHYRKYCKASCGLCNTKLKPHEE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006917XLOC_006917Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00012298TCONS_00012298Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003582ShKT_dom
IPR001506Peptidase_M12A
IPR024079MetalloPept_cat_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004222metalloendopeptidase activity
GO:0008237metallopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0008237 metallopeptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 198..218
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..200
NoneNo IPR availableSUPERFAMILY55486Metalloproteases ("zincins"), catalytic domaincoord: 1..88
IPR003582ShKT domainSMARTSM00254ShkT_1coord: 204..241
e-value: 0.0079
score: 25.4
coord: 249..283
e-value: 0.054
score: 22.6
IPR003582ShKT domainPFAMPF01549ShKcoord: 249..282
e-value: 0.062
score: 13.8
coord: 204..240
e-value: 0.023
score: 15.1
IPR003582ShKT domainPROSITEPS51670SHKTcoord: 205..240
score: 8.974
IPR003582ShKT domainPROSITEPS51670SHKTcoord: 250..282
score: 9.541
IPR001506Peptidase M12APFAMPF01400Astacincoord: 1..89
e-value: 4.6E-19
score: 68.7
IPR024079Metallopeptidase, catalytic domainGENE3D3.40.390.10coord: 1..88
e-value: 3.3E-19
score: 69.1

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00012298-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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