TCONS_00012296-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00012296-protein
Unique NameTCONS_00012296-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length521

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00012296-protein ID=TCONS_00012296-protein|Name=TCONS_00012296-protein|organism=Clytia hemisphaerica|type=polypeptide|length=521bp
MNSLFIFAVLFGVVTIYGHPGPEKYEIGSHNYEMSAMRQIELENSGSNEP
LKYIDIHKVPETDPSELPEGVQAAIIKNERGLWPNKLVWYSFDSEFSSDE
ARQEVRDAVKGISDVTCIKFREYNPATDAKPKHYVRIFSGSGCWSYIGYA
TFNGKGNQDMSLRDPGCVNKKIIQHEFIHALGAYHEQSRNDRDKYINLFK
ENMVDGAWGQFQKQTLSTIDSRGVAYDGESIMHYSRYAFSKNGNPTMQWK
GNPSKRLGGTKLSESDIKQLNLLYSCKLEPSTTTTTAPKTTTTTPKTTTT
TPKTTTTTPKTTTTTPKTTTTTPKTTTTTPKTTTTTPKTTTTTPKTTTTT
PKTTTTTPKTTTTAPKTTTTTPKTTTTTTKTTTTRTTTTQRPGECKDKKS
FCSSIGNIVAWCRYKGVQVSCPKTCGLCDKTTTTTTTKAPSGNGCIDVSR
HCSERYRNCSSGIYQRRCRKACNQCDKPLPPKCKGLSDSSPKCPVVVRSS
NGACNVYRNHCQLSCCLRDRN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006915XLOC_006915Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00012296TCONS_00012296Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001506Peptidase_M12A
IPR006026Peptidase_Metallo
IPR024079MetalloPept_cat_dom
IPR003582ShKT_dom
IPR034035Astacin-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004222metalloendopeptidase activity
GO:0008237metallopeptidase activity
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0008237 metallopeptidase activity
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001506Peptidase M12APRINTSPR00480ASTACINcoord: 186..203
score: 42.59
coord: 167..185
score: 45.26
coord: 105..123
score: 29.39
coord: 225..240
score: 55.0
coord: 262..275
score: 42.98
IPR001506Peptidase M12APFAMPF01400Astacincoord: 82..277
e-value: 1.7E-52
score: 177.7
IPR006026Peptidase, metallopeptidaseSMARTSM00235col_5coord: 79..230
e-value: 5.0E-44
score: 162.3
IPR024079Metallopeptidase, catalytic domainGENE3D3.40.390.10coord: 74..278
e-value: 9.0E-53
score: 178.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 281..385
NoneNo IPR availableSUPERFAMILY55486Metalloproteases ("zincins"), catalytic domaincoord: 77..277
IPR003582ShKT domainPROSITEPS51670SHKTcoord: 395..428
score: 8.752
IPR034035Astacin-like metallopeptidase domainCDDcd04280ZnMc_astacin_likecoord: 85..274
e-value: 5.06822E-72
score: 228.224

Blast
[Close]
BLAST of TCONS_00012296-protein vs. Swiss-Prot (Human)
Match: MEP1B (Meprin A subunit beta OS=Homo sapiens GN=MEP1B PE=1 SV=3)

HSP 1 Score: 112.849 bits (281), Expect = 3.068e-26
Identity = 84/279 (30.11%), Postives = 133/279 (47.67%), Query Frame = 0 
Query:    7 FAVLFGVVTIYGHPGPEKYEIGSHNYEMSAMRQIELENSGSNEPLKYIDIHKVPETDPSELPEG---VQAAIIKN----ERGLWPNKLVWYSFDSEFSSDEARQEVRDAVKGISDVTCIKFREYNPATDAKPKHYVRIFSGSGCWSYIGYATFNGKGNQDMSLRDPGCVNKKIIQHEFIHALGAYHEQSRNDRDKYINLFKENMVDGAWGQFQKQTLSTIDSRGVAYDGESIMHYSRYAFSKNGNPTMQWKGNPSKRLGGTKL--SESDIKQLNLLYSC 276
            F  L  ++ I G   PE +++         M Q               DI  + E    +L EG   +  A I+N    E+  WP+ + +   DS      A+  + +A +     TCI F+ +     A   +Y+ +F GSGCWS +G       G Q++S+    C     +QHEF+HALG +HEQSR+DRD Y+ +  + ++ G    F   +    DS  V YD  S+MHYS+ AF     PT+  + +  + + G ++  S+SD+ +LN LY+C
Sbjct:    9 FLFLDALLVISGLATPENFDVDG------GMDQ---------------DIFDINEGLGLDLFEGDIRLDRAQIRNSIIGEKYRWPHTIPYVLEDS--LEMNAKGVILNAFERYRLKTCIDFKPW-----AGETNYISVFKGSGCWSSVGNRRV---GKQELSI-GANCDRIATVQHEFLHALGFWHEQSRSDRDDYVRIMWDRILSGREHNFNTYSDDISDSLNVPYDYTSVMHYSKTAFQNGTEPTIVTRISDFEDVIGQRMDFSDSDLLKLNQLYNC 255
The following BLAST results are available for this feature:
BLAST of TCONS_00012296-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MEP1B3.068e-2630.11Meprin A subunit beta OS=Homo sapiens GN=MEP1B PE=... [more]
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