TCONS_00012292-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00012292-protein
Unique NameTCONS_00012292-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length423

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00012292-protein ID=TCONS_00012292-protein|Name=TCONS_00012292-protein|organism=Clytia hemisphaerica|type=polypeptide|length=423bp
EIRNNNNKIYKMKLQSLLLVLCIVVCGSDGLNVKTKNDFTATPPMGWLQW
ERYRCILDCETYPEDCIRDSLFMRQGKRLHDDGYAAAGYVHVNIDDCWSE
MERDANGTLIADKKRFPNGLKSLADYMHNLGLKLGIYTDMGIKTCAGYPA
AIFHMQKDTQTFADWGIDMIKLDGCNSCTDLFKAGHEAFKFYINQTGREM
LYSCEWPSYLPESKPKPYEDIAKVCNTWRNGADVQDSWSSVMNIINYNGD
HQDEMIPYIKPGAFNDPDMLLIGDYSLSEDQSKTQFAIWSILAAPLMISA
NLETMKDWQKAILLNEEIIAVDQDSLGKMGRRVYKNSNQQTWVKPLADGG
MAVAIMSTREDIPVFMSVDFKLLNITGSWNARDLYALKDLGSYEGSFKAM
VNPSGVVMVKLTKASRVISADFV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006912XLOC_006912Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00012292TCONS_00012292Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002241Glyco_hydro_27
IPR013785Aldolase_TIM
IPR000111Glyco_hydro_27/36_CS
IPR017853Glycoside_hydrolase_SF
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0003824catalytic activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
molecular_function GO:0003824 catalytic activity
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002241Glycoside hydrolase, family 27PRINTSPR00740GLHYDRLASE27coord: 37..56
score: 44.75
coord: 83..98
score: 56.56
coord: 259..278
score: 43.75
coord: 185..203
score: 28.42
coord: 124..145
score: 55.68
coord: 280..301
score: 39.09
coord: 158..175
score: 56.94
IPR002241Glycoside hydrolase, family 27PFAMPF16499Melibiase_2coord: 42..324
e-value: 7.4E-121
score: 402.6
IPR002241Glycoside hydrolase, family 27CDDcd14792GH27coord: 43..324
e-value: 1.57952E-119
score: 351.087
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 190..326
e-value: 8.9E-36
score: 123.6
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 4..189
e-value: 1.2E-44
score: 152.2
NoneNo IPR availableGENE3D2.60.40.1180coord: 327..423
e-value: 4.1E-21
score: 74.6
NoneNo IPR availablePFAMPF17450Melibiase_2_Ccoord: 327..405
e-value: 1.5E-8
score: 34.6
NoneNo IPR availableSUPERFAMILY51011Glycosyl hydrolase domaincoord: 326..412
IPR000111Glycoside hydrolase family 27/36, conserved sitePROSITEPS00512ALPHA_GALACTOSIDASEcoord: 88..104
IPR017853Glycoside hydrolase superfamilySUPERFAMILY51445(Trans)glycosidasescoord: 40..325

Blast
[Close]
BLAST of TCONS_00012292-protein vs. Swiss-Prot (Human)
Match: NAGAB (Alpha-N-acetylgalactosaminidase OS=Homo sapiens GN=NAGA PE=1 SV=2)

HSP 1 Score: 343.199 bits (879), Expect = 2.651e-115
Identity = 174/402 (43.28%), Postives = 252/402 (62.69%), Query Frame = 0 
Query:   18 LLVLCIVVCGSDGLNVKTKNDFTATPPMGWLQWERYRCILDCETYPEDCIRDSLFMRQGKRLHDDGYAAAGYVHVNIDDCWSEMERDANGTLIADKKRFPNGLKSLADYMHNLGLKLGIYTDMGIKTCAGYPAAIF-HMQKDTQTFADWGIDMIKLDGCNSCTDLFKAGHEAFKFYINQTGREMLYSCEWPSYLPESKPKP-YEDIAKVCNTWRNGADVQDSWSSVMNIINYNGDHQDEMIPYIKPGAFNDPDMLLIGDYSLSEDQSKTQFAIWSILAAPLMISANLETMKDWQKAILLNEEIIAVDQDSLGKMGRRVYKNSNQ-QTWVKPLADGGMAVAIMSTREDIPVFMSVDFKLLNITGS--WNARDLYA------LKDLGSYEGSFKAMVNPSGVVM 408
            +L+  +++ G     +   N    TPPMGWL WER+RC ++C+  P++CI + LFM    R+  DG+   GY ++NIDDCW    RDA+G L+ D KRFP+G+  LADY+H+LGLKLGIY DMG  TC GYP      + +D QTFA+W +DM+KLDGC S  +    G+      +N TGR + +SC WP+Y     P+  Y  +A +CN WRN  D+QDSW SV++I+N+  +HQD + P   PG +NDPDMLLIG++ LS +QS+ Q A+W++LAAPL++S +L T+      IL N  +I ++QD LG  GRR++K  +  + +++PL++   A+   S R D+P         LN TGS  + A+D+Y+      L+D    E +F  ++NPSGVVM
Sbjct:    1 MLLKTVLLLGHVAQVLMLDNGLLQTPPMGWLAWERFRCNINCDEDPKNCISEQLFMEMADRMAQDGWRDMGYTYLNIDDCWIG-GRDASGRLMPDPKRFPHGIPFLADYVHSLGLKLGIYADMGNFTCMGYPGTTLDKVVQDAQTFAEWKVDMLKLDGCFSTPEERAQGYPKMAAALNATGRPIAFSCSWPAYEGGLPPRVNYSLLADICNLWRNYDDIQDSWWSVLSILNWFVEHQDILQPVAGPGHWNDPDMLLIGNFGLSLEQSRAQMALWTVLAAPLLMSTDLRTISAQNMDILQNPLMIKINQDPLGIQGRRIHKEKSLIEVYMRPLSNKASALVFFSCRTDMPYRYHSSLGQLNFTGSVIYEAQDVYSGDIISGLRD----ETNFTVIINPSGVVM 397
The following BLAST results are available for this feature:
BLAST of TCONS_00012292-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NAGAB2.651e-11543.28Alpha-N-acetylgalactosaminidase OS=Homo sapiens GN... [more]
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