TCONS_00012210-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00012210-protein
Unique NameTCONS_00012210-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1053

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00012210-protein ID=TCONS_00012210-protein|Name=TCONS_00012210-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1053bp
MKRFLLLFLLSLCFYEISGFVRNIKGNTFSCPTLSTGAEAEGVIDLTMAE
PKVYRTRVECLKECERLKQTNNSAINGALFDFYENGKICQCLINLTRYKW
TRYFTYYQNGIKNNTKLPKYIRRSGRALTNGFANATVLPVAKNSTITINN
CTTRCQELNSTYGDISAFSIKALGSIRHAYSRLLNVTECTCLRNPRFGIT
DLKRTCFFSPLETPRCKWFSSKIPEARDTFPRPFGELAVNFSTCMIECRR
IQLDREIPVFGVMMDSLYAGECRCTTEKKRYSRFSCILRNGGKCNLHSGL
PVSNGTIMMSEKSMPVRQCIELCIEAKKNNSAISGVEMKDIIWTNRCICH
LNATMVRTYRSCFFDNLPQLSTVQPATVLPTTNTSMSTTDTKVLATISPP
PEQKESPQQVLKTVFKIFNSTDNITICRSDDAHDNCTTLEGALTLLNCLV
FNQTQNFNTTEKGGADEKIRKEFQQLTLSYSLLANSTTPKQTQKLAPIMF
SAFDQISFSPALRPRSSPEEEQSQPDTKPKPTSTSTQIKRTILQTIDTVV
RKVMEVPSLSLDIGLQNMAIKIESLDVTEEPGNKGVREKEIAVHSSENGE
ILLIKMTTLNEDISMTDLSAIKVPKTALPSNQSKISVASVVYKNDLFFAQ
SVGKTTNQITDRVSGSVGSVIHSLIVGQQEIKDLFDPIKLIFKTNQQMKR
SQQKITNTTCSFWVEDSNHQYYWSDQGCKTVNQTIDHVICQCNHLTNFAI
LFDVQQTAQHSPSSKGLEIMTKIGCGVSIAGLTLTVFFHLFIAKLRTKLH
SHILISLSSSLIMLLALFVLFAEKWSSMSRLSCQLVAGGIHFFLLSSFAW
MIVEGYNLHSSIVSIFLIRGGERFFWWALSFSIVIPAGLVGSNYALYPQS
LGNERFCVVHGPGFYMFILAPIIFTIIFNAVILVRIIHTIRKSDKKFKNK
KSRPEDENIRLKMIRIAFTCSCIMGLSWIFGIFAIEDASVVFQWLFTIFN
SLQGFFIFVMHTLRNKEIQNQIRNCQVRAQGANSLQNSPKSLQSQNTINM
TLR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006867XLOC_006867Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00012210TCONS_00012210Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000832GPCR_2_secretin-like
IPR000203GPS
IPR017981GPCR_2-like
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
GO:0004888transmembrane signaling receptor activity
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
GO:0007166cell surface receptor signaling pathway
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007166 cell surface receptor signaling pathway
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004930 G-protein coupled receptor activity
molecular_function GO:0004888 transmembrane signaling receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000832GPCR, family 2, secretin-likePRINTSPR00249GPCRSECRETINcoord: 769..793
score: 20.68
coord: 916..941
score: 24.84
coord: 835..858
score: 28.67
coord: 993..1014
score: 23.42
IPR000832GPCR, family 2, secretin-likePFAMPF000027tm_2coord: 767..1007
e-value: 3.5E-30
score: 105.0
IPR000203GPS motifSMARTSM00303GPS_3coord: 706..757
e-value: 2.2E-14
score: 63.8
IPR000203GPS motifPFAMPF01825GPScoord: 709..751
e-value: 1.6E-11
score: 44.6
IPR000203GPS motifPROSITEPS50221GPScoord: 707..757
score: 15.21
NoneNo IPR availableGENE3D1.20.1070.10coord: 750..1051
e-value: 1.1E-31
score: 109.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1033..1053
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 510..538
NoneNo IPR availableSUPERFAMILY81321Family A G protein-coupled receptor-likecoord: 775..1028
IPR017981GPCR, family 2-likePROSITEPS50261G_PROTEIN_RECEP_F2_4coord: 767..1015
score: 24.673

Blast
[Close]
BLAST of TCONS_00012210-protein vs. Swiss-Prot (Human)
Match: AGRL2 (Adhesion G protein-coupled receptor L2 OS=Homo sapiens GN=ADGRL2 PE=1 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 4.484e-44
Identity = 101/325 (31.08%), Postives = 169/325 (52.00%), Query Frame = 0 
Query:  707 NTTCSFW-VEDSNHQYYWSDQGCKTVNQTIDHVICQCNHLTNFAILFDVQQTAQHSPSSKGL-EIMTKIGCGVSIAGLTLTVFFHLFIAKL---RTKLHSHILISLSSSLIMLLALFVLFAEKWSSMSRLSCQLVAGGIHFFLLSSFAWMIVEGYNLHSSIVSIFLIRGGERFFWWALSFSIVIPAGLVGSNYALYPQSLGNERFCVVHGPGFYMF-ILAPIIFTIIFNAVILVRIIHTIRKSDKKFKNKKSRPEDENIRLKMIRIAFTCSCIMGLSWIFGIFAIEDASVVFQWLFTIFNSLQGFFIFVMHTLRNKEIQNQIRNC 1025
            N  CSFW   +     YWS QGCK V+       C C+HLTNFAIL   ++ A      + L  ++T +G  +S+  L + +F   F   L   R  +H ++ I+L       +A F+       +   ++C + AG +HFF L++FAWM +EG  L+  +V +F      + +++   +  + PA +VG + A+  +S G E+ C +H   ++++  + P+ F I+ N + LV  +  + K     K   SR E  NI+   +  AF   C++GL+W FG+  I + ++V  +LFTIFN+ QG FIF+ H    K+++ +   C
Sbjct:  785 NANCSFWNYSERTMMGYWSTQGCKLVDTNKTRTTCACSHLTNFAILMAHREIAYKDGVHELLLTVITWVGIVISLVCLAICIFTFCFFRGLQSDRNTIHKNLCINL------FIAEFIFLIGIDKTKYAIACPIFAGLLHFFFLAAFAWMCLEGVQLYLMLVEVFESEYSRKKYYYVAGY--LFPATVVGVSAAIDYKSYGTEKACWLHVDNYFIWSFIGPVTFIILLNIIFLVITLCKMVKHSNTLKPDSSRLE--NIK-SWVLGAFALLCLLGLTWSFGLLFINEETIVMAYLFTIFNAFQGVFIFIFHCALQKKVRKEYGKC 1098
The following BLAST results are available for this feature:
BLAST of TCONS_00012210-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AGRL24.484e-4431.08Adhesion G protein-coupled receptor L2 OS=Homo sap... [more]
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