TCONS_00012183-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00012183-protein
Unique Name	TCONS_00012183-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	377

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00012183-protein ID=TCONS_00012183-protein|Name=TCONS_00012183-protein|organism=Clytia hemisphaerica|type=polypeptide|length=377bp
MADFKVKTYSRFAALGFDSDEEGKKNEQSNDPKSNAAKNAKKRANKKKKK
ATEAEKRNELRNMAFSKPVSAATIQSVHKMNHPLQQNNGHTNPPPLSTAS
VKPVPSESEAVDPQSWQDWKNKDEQFVTDQFSQDMEVALRLSASDAYTTT
QQKPKEEQKKKRNHKTATMSLEEFTQMANERALTEQTFPSNHPPLTGYAP
EELDPNYFEVPEEPVLSAAPSKTSNDDKKKNKKKNKKKNNQPKATLSDIL
SPEQTNGTDHQMTTSAQPGMDVTSLAIYQNNLEEKVKEINNLKDENEKLM
GELAQVKKRNKQLCFILAQGEMKEKADILLQVDELNNIKTELSSELETVY
SELEQERSKVSHLKQELSKVPGLKNSQ

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_006857	XLOC_006857	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00012183	TCONS_00012183	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR026109	GKAP1

Vocabulary: **Biological Process**
Term	Definition
GO:0007165	signal transduction

Vocabulary: **Cellular Component**
Term	Definition
GO:0005794	Golgi apparatus

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007165	signal transduction
cellular_component	GO:0005794	Golgi apparatus

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 275..309
None	No IPR available	COILS	Coil	Coil	coord: 34..57
None	No IPR available	COILS	Coil	Coil	coord: 339..366
None	No IPR available	GENE3D	1.20.5.170		coord: 20..371 e-value: 0.001 score: 18.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 145..168
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..266
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..123
IPR026109	G kinase-anchoring protein 1	PRINTS	PR02083	GKINASEAP1	coord: 320..339 score: 78.0 coord: 5..26 score: 37.27 coord: 131..150 score: 33.5 coord: 116..131 score: 46.25

Blast

[Close]

BLAST of TCONS_00012183-protein vs. Swiss-Prot (Human)
Match: GKAP1 (G kinase-anchoring protein 1 OS=Homo sapiens GN=GKAP1 PE=1 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.080e-25
Identity = 120/389 (30.85%), Postives = 180/389 (46.27%), Query Frame = 0

Query:    8 TYSRFAAL----GFDSDEE-----GKKNEQSNDPKSNAAKNAKKRANKKKKKATEAEKRNELRNMAFSKPVSAATIQSVHKMNHPLQQNNGHTNPPPLSTASVKPVPSESEAVDPQSWQDWKNKDEQFVTDQFSQDMEVALRLS----------ASDAY-TTTQQKPKEEQKKKRNHKT----ATMSLEEFTQMANERALTEQTFPSNHPPLTGYAPEELDPNYFEVPEEPVLSAAPSKTSNDDKKKNKKKNKKKNNQPKATLSDILSPEQTNGTDHQMTTSAQPGMDVTSLAIYQNNLEEKVKEINNLKDENEKLMGELAQVKKRNKQLCFILAQGEMKEKADILLQVDELNNIKTELSSELETVYSELEQERSKVSHLKQELSKVPG 372
            T SRFA L    G  SD E     G+   +S    S +  N KKR  ++KKK  +  + NELRN+AF K +   +  +V    H L          PLS     PV  +S     ++WQ+W+ +DEQ  ++ F  D+E AL LS            DA  T+TQ K   ++ K++NH+      T+SL++F         +E         L+       D  +F   E             DD  K   + K++       L++    +     +H      + G  +  L +    LE K  EI  LK+   +   +  +VK RN QL  +L +GEMK+KA+ILLQVDE  +IK EL+ ++ ++++ LEQERSKV  L+ EL+K  G
Sbjct:   12 TASRFALLQVDSGSGSDSEPGKGKGRNTGKSQTLGSKSTTNEKKREKRRKKKEQQQSEANELRNLAF-KKIPQKSSHAVCNAQHDL----------PLSN----PVQKDSR---EENWQEWRQRDEQLTSEMFEADLEKALLLSKLEYEEHKKEYEDAENTSTQSKVMNKKDKRKNHQGKDRPLTVSLKDFH--------SEDHISKKTEELSSSQTLSHDGGFFNRLE-------------DDVHKILIREKRREQ-----LTEYNGTDNCTAHEHNQEVVLKDGR-IERLKL---ELERKDAEIQKLKNVITQWEAKYKEVKARNAQLLKMLQEGEMKDKAEILLQVDESQSIKNELTIQVTSLHAALEQERSKVKVLQAELAKYQG 352

The following BLAST results are available for this feature:

BLAST of TCONS_00012183-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00012183-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
GKAP1	1.080e-25	30.85	G kinase-anchoring protein 1 OS=Homo sapiens GN=GK...	[more]

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TCONS_00012183-protein (polypeptide) - C. hemisphaerica