TCONS_00012122-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00012122-protein
Unique NameTCONS_00012122-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length256

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00012122-protein ID=TCONS_00012122-protein|Name=TCONS_00012122-protein|organism=Clytia hemisphaerica|type=polypeptide|length=256bp
MFLTRTEYDRGVNLFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVVLAV
ERRITSPLIIPKSIEKIFEVDQHIGCAMSGLIADSRTMVDKARVEGQNHW
FTYNEKMSVESLTQSLSNLALAFGNRDYDKGAMSRPFGVALLIGGIDENG
PQLFHLDPSGTFLQYDAKAIGSASEGAQQTLQEVYHKSMTLKEACNQALT
ILKQVMEEKLTATNIELATITVADNFKMFSKDQLEELIKEINKRMKILFK
TPQNRG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006816XLOC_006816Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00012122TCONS_00012122Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000426Proteasome_asu_N
IPR029055Ntn_hydrolases_N
IPR001353Proteasome_sua/b
IPR023332Proteasome_alpha-type
IPR033812Proteasome_alpha_type_5
Vocabulary: Cellular Component
TermDefinition
GO:0019773proteasome core complex, alpha-subunit complex
GO:0005839proteasome core complex
Vocabulary: Molecular Function
TermDefinition
GO:0004175endopeptidase activity
GO:0004298threonine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
GO:0051603proteolysis involved in cellular protein catabolic process
GO:0043161proteasome-mediated ubiquitin-dependent protein catabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process GO:0051603 proteolysis involved in cellular protein catabolic process
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
cellular_component GO:0005839 proteasome core complex
cellular_component GO:0019773 proteasome core complex, alpha-subunit complex
molecular_function GO:0004175 endopeptidase activity
molecular_function GO:0004298 threonine-type endopeptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 231..251
IPR000426Proteasome alpha-subunit, N-terminal domainSMARTSM00948Proteasome_A_N_2coord: 8..30
e-value: 2.7E-10
score: 50.2
IPR000426Proteasome alpha-subunit, N-terminal domainPFAMPF10584Proteasome_A_Ncoord: 8..30
e-value: 1.5E-12
score: 46.8
IPR000426Proteasome alpha-subunit, N-terminal domainPROSITEPS00388PROTEASOME_ALPHA_1coord: 8..30
IPR029055Nucleophile aminohydrolases, N-terminalGENE3D3.60.20.10coord: 7..247
e-value: 3.0E-89
score: 297.9
IPR029055Nucleophile aminohydrolases, N-terminalSUPERFAMILY56235N-terminal nucleophile aminohydrolases (Ntn hydrolases)coord: 7..243
IPR001353Proteasome, subunit alpha/betaPFAMPF00227Proteasomecoord: 31..220
e-value: 8.8E-57
score: 191.6
IPR023332Proteasome alpha-type subunitPROSITEPS51475PROTEASOME_ALPHA_2coord: 23..238
score: 80.564
IPR033812Proteasome subunit alpha5CDDcd03753proteasome_alpha_type_5coord: 8..220
e-value: 1.50511E-151
score: 423.286

Blast
[Close]
BLAST of TCONS_00012122-protein vs. Swiss-Prot (Human)
Match: PSA5 (Proteasome subunit alpha type-5 OS=Homo sapiens GN=PSMA5 PE=1 SV=3)

HSP 1 Score: 404.445 bits (1038), Expect = 1.164e-144
Identity = 190/241 (78.84%), Postives = 214/241 (88.80%), Query Frame = 0 
Query:    1 MFLTRTEYDRGVNLFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVVLAVERRITSPLIIPKSIEKIFEVDQHIGCAMSGLIADSRTMVDKARVEGQNHWFTYNEKMSVESLTQSLSNLALAFGNRDYDKGAMSRPFGVALLIGGIDENGPQLFHLDPSGTFLQYDAKAIGSASEGAQQTLQEVYHKSMTLKEACNQALTILKQVMEEKLTATNIELATITVADNFKMFSKDQLEELIKEI 241
            MFLTR+EYDRGVN FSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGV LAVE+RITSPL+ P SIEKI E+D HIGCAMSGLIAD++T++DKARVE QNHWFTYNE M+VES+TQ++SNLAL FG  D D GAMSRPFGVALL GG+DE GPQLFH+DPSGTF+Q DA+AIGSASEGAQ +LQEVYHKSMTLKEA   +L ILKQVMEEKL ATNIELAT+    NF MF+K++LEE+IK+I
Sbjct:    1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLIILKQVMEEKLNATNIELATVQPGQNFHMFTKEELEEVIKDI 241
The following BLAST results are available for this feature:
BLAST of TCONS_00012122-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PSA51.164e-14478.84Proteasome subunit alpha type-5 OS=Homo sapiens GN... [more]
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