TCONS_00012030-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00012030-protein
Unique NameTCONS_00012030-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length147

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00012030-protein ID=TCONS_00012030-protein|Name=TCONS_00012030-protein|organism=Clytia hemisphaerica|type=polypeptide|length=147bp
MLRNYSCLLCKRSLRNVARRTIWNSSNSTVARGASNLQMSNVIQEPSARL
SRLIDPHKGFIRRCHSESMSLVEYTDIVSDTLEDLADHFDHLADEGFFDE
GYDCILADGVMTVNLGQHGIYVINKQTPNRQIWLSSPVRFYTSIGGK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006761XLOC_006761Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00012030TCONS_00012030Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002908Frataxin/CyaY
IPR020895Frataxin_CS
Vocabulary: Molecular Function
TermDefinition
GO:0008199ferric iron binding
Vocabulary: Biological Process
TermDefinition
GO:0016226iron-sulfur cluster assembly
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016226 iron-sulfur cluster assembly
molecular_function GO:0008199 ferric iron binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002908Frataxin/CyaYPRINTSPR00904FRATAXINcoord: 123..138
score: 87.5
coord: 87..106
score: 35.0
coord: 69..87
score: 26.32
IPR002908Frataxin/CyaYSMARTSM01219Frataxin_Cyay_2coord: 69..147
e-value: 1.5E-12
score: 57.7
IPR002908Frataxin/CyaYGENE3D3.30.920.10coord: 62..143
e-value: 1.6E-23
score: 82.3
IPR002908Frataxin/CyaYPFAMPF01491Frataxin_Cyaycoord: 69..139
e-value: 1.4E-18
score: 66.8
IPR002908Frataxin/CyaYPROSITEPS50810FRATAXIN_2coord: 69..147
score: 18.245
IPR002908Frataxin/CyaYSUPERFAMILY55387Frataxin/Nqo15-likecoord: 61..140
IPR020895Frataxin conserved sitePROSITEPS01344FRATAXIN_1coord: 122..136

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00012030-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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