TCONS_00012018-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00012018-protein
Unique NameTCONS_00012018-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length698

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00012018-protein ID=TCONS_00012018-protein|Name=TCONS_00012018-protein|organism=Clytia hemisphaerica|type=polypeptide|length=698bp
MHISTQHSTNIMNLFKWLFGKRKERNHQIQYQEKTVKILCMGKERVGKTA
VIQKLCNQEDFSDTHTPTLYDDHLKQVIVDEYNVTMQFMDLGGSQNFPSM
QQVFIQQADIYILFYSVDDADSFTQMLKYRDQISSIKGKHSTELPLMVVR
NKTDLKQKRLRKEIERRKTIPQWCGKVYDVSAKTGLKINAIMDSLIEESK
FIGNEKNLGNLKVSGRYIFDDDGKRVFSASEVYHKAPTLFGEKDNSDEKM
EKRRRRSMNQPSRRMTRALTRSLSLGPMRRRPLSQATDSKENKDVCTKQP
WMKEVEETERANSINRDDEKTASLRSANSIEQSPRNSINKADSKESIVSN
KRRDSPKDTKKASADVHKPPTNESGESSSVGDVKSNSLDTNTQRKRSTFK
MAGKKASFDEVVPSPIRPRLQRKKSLSHTDINLLAPDMRNRSASANSSLP
RIRKVSSFRKEKPKLEIVHTTLRSEDTEENVPFLAQRQYGRSVSISSRES
RESFSKPAKKLSLGRRLSTSIDCISDGEFDNNSNDDAPVPGLLTTRRRSL
SQNDLSLSIQTFNNKFQRGGKMFEERNFFGKRKSKNNKNNSLPAKITDNV
AQQINSQPGVVNRRSRSISLYRKKLPIQTAIVEELDDSTPSRQRRRKMSS
SVGNLVDDRPASYDENKNFLASIKSKPVSLKEEDTLDGTPITFAKLSN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006752XLOC_006752Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00012018TCONS_00012018Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 60..76
score: 23.09
coord: 36..57
score: 27.67
coord: 77..99
score: 22.21
coord: 142..155
score: 36.82
coord: 177..199
score: 20.37
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 36..202
e-value: 5.5E-4
score: -59.9
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 33..202
e-value: 3.7E-12
score: 53.7
NoneNo IPR availableGENE3D3.40.50.300coord: 101..200
e-value: 4.5E-15
score: 54.9
NoneNo IPR availableGENE3D3.30.70.1390coord: 34..100
e-value: 8.0E-12
score: 44.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 240..405
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 636..659
NoneNo IPR availablePROSITEPS51419RABcoord: 30..266
score: 12.928
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 37..198
e-value: 2.1E-24
score: 85.9
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 34..175
e-value: 4.3E-13
score: 47.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 34..197

Blast
[Close]
BLAST of TCONS_00012018-protein vs. Swiss-Prot (Human)
Match: RALB (Ras-related protein Ral-B OS=Homo sapiens GN=RALB PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.287e-17
Identity = 44/162 (27.16%), Postives = 92/162 (56.79%), Query Frame = 0 
Query:   37 KILCMGKERVGKTAVIQKLCNQEDFSDTHTPTLYDDHLKQVIVDEYNVTMQFMDLGGSQNFPSMQQVFIQQADIYILFYSVDDADSFTQMLKYRDQISSIKGKHSTELPLMVVRNKTDLKQKRLRKEIERRKTIPQWCGKVYDVSAKTGLKINAIMDSLIEE 198
            K++ +G   VGK+A+  +    E F + + PT  D + K+V++D   V +  +D  G +++ +++  + +  + ++L +S+ + +SFT   ++R+QI  +K +   ++PL+VV NK+DL+++R     E R    +W  +  + SAKT   ++ +   L+ E
Sbjct:   16 KVIMVGSGGVGKSALTLQFMYDE-FVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEED-KIPLLVVGNKSDLEERRQVPVEEARSKAEEWGVQYVETSAKTRANVDKVFFDLMRE 175
The following BLAST results are available for this feature:
BLAST of TCONS_00012018-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RALB1.287e-1727.16Ras-related protein Ral-B OS=Homo sapiens GN=RALB ... [more]
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