TCONS_00011977-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011977-protein
Unique NameTCONS_00011977-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length200

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011977-protein ID=TCONS_00011977-protein|Name=TCONS_00011977-protein|organism=Clytia hemisphaerica|type=polypeptide|length=200bp
FSLTILKENCTKNKMLTKFKFLAYDLAFLNLSLRCFCSKSTQRTLPVIFR
GMNYPKCSFSTTVTKQSNSFSKEELKKRLTRMQYEVTQNAGTERAFTGEY
WDNHRKGIYKCVVCDEDLFLSSTKYESGSGWPSFFDVIDKSKVKLIVDRS
YGMVRTEVVCNKCKSHLGHLFEDGPRPTGQRYYLYLIKKNVKKYFKKMFQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006719XLOC_006719Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011977TCONS_00011977Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002579Met_Sox_Rdtase_MsrB
IPR011057Mss4-like
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0033743peptide-methionine (R)-S-oxide reductase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0033743 peptide-methionine (R)-S-oxide reductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.170.150.20coord: 60..187
e-value: 4.7E-51
score: 171.8
IPR002579Peptide methionine sulphoxide reductase MrsBPFAMPF01641SelRcoord: 74..183
e-value: 1.9E-47
score: 160.1
IPR002579Peptide methionine sulphoxide reductase MrsBTIGRFAMTIGR00357TIGR00357coord: 71..184
e-value: 7.1E-53
score: 176.2
IPR002579Peptide methionine sulphoxide reductase MrsBPROSITEPS51790MSRBcoord: 72..194
score: 61.538
IPR011057Mss4-likeSUPERFAMILY51316Mss4-likecoord: 70..184

Blast
[Close]
BLAST of TCONS_00011977-protein vs. Swiss-Prot (Human)
Match: MSRB3 (Methionine-R-sulfoxide reductase B3 OS=Homo sapiens GN=MSRB3 PE=1 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 5.161e-47
Identity = 68/115 (59.13%), Postives = 84/115 (73.04%), Query Frame = 0 
Query:   70 FSKEELKKRLTRMQYEVTQNAGTERAFTGEYWDNHRKGIYKCVVCDEDLFLSSTKYESGSGWPSFFDVIDKSKVKLIVDRSYGMVRTEVVCNKCKSHLGHLFEDGPRPTGQRYYL 184
            FS++EL+KRLT +QY VTQ  GTE AF GEY  +   GIYKCVVC   LF S TK++SGSGWPSF DVI+   +    D SYGM R E  C++C +HLGH+F+DGPRPTG+RY +
Sbjct:   45 FSQQELRKRLTPLQYHVTQEKGTESAFEGEYTHHKDPGIYKCVVCGTPLFKSETKFDSGSGWPSFHDVINSEAITFTDDFSYGMHRVETSCSQCGAHLGHIFDDGPRPTGKRYCI 159
The following BLAST results are available for this feature:
BLAST of TCONS_00011977-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MSRB35.161e-4759.13Methionine-R-sulfoxide reductase B3 OS=Homo sapien... [more]
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