TCONS_00011973-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011973-protein
Unique NameTCONS_00011973-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length558

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011973-protein ID=TCONS_00011973-protein|Name=TCONS_00011973-protein|organism=Clytia hemisphaerica|type=polypeptide|length=558bp
MQEIMKTLFRLAVIVLSICLLIITYTLTTSKENAYSKFSHSNDKLVPKNV
DKFEIHHIDQKSRDAIESNWDQFFGVTRSNRRGNDGAQEVDPEVNENEEE
NEEEEDSKRLKTDGADEEEEQWEKYLMKHPTAKKGLKNGEDVLQKKHKAN
KKSKGSRHIEEEKRNKESLKVDRKLEHVRKKKARLKMKIILIYTGLHKKV
YWYNLPKNETKSYLRRTKCPQTKCHITYDKQLLPLADAVIFHERNMPSLD
MLRTLSRRQNRPISQRWIYFTSETPKNSAISSVPYDGLFNWTMTYRTDSD
IYLPYLQYRELDKNEKPPPVINYAKTKNSTIAWLVGNCNFGFRMKFATLL
ALETKVFVGGGCRDNYPDRLPCTRWCGLDTLKTYKFYLSFENGVCTDYIT
EKYWRYLELGLVPIVLGGADYSNPKLVIPGSFIDASKFKTVKDLAKYVEY
LDKNDTAYNEYFTWKQKYKIWHPPTGDWPFESYMMCEICKKLFSNLPPKV
YTKLSNFWNIHTDCEIPEDDLTDKFIPKDFDKNQVDKDELERMKHSKDNI
PKDFDEED
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006717XLOC_006717Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011973TCONS_00011973Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031481Glyco_tran_10_N
IPR001503Glyco_trans_10
Vocabulary: Molecular Function
TermDefinition
GO:0008417fucosyltransferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006486protein glycosylation
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006486 protein glycosylation
cellular_component GO:0016020 membrane
molecular_function GO:0008417 fucosyltransferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031481Fucosyltransferase, N-terminalPFAMPF17039Glyco_tran_10_Ncoord: 189..305
e-value: 7.1E-25
score: 87.5
IPR001503Glycosyl transferase family 10PFAMPF00852Glyco_transf_10coord: 327..508
e-value: 1.5E-44
score: 151.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..169
NoneNo IPR availableSUPERFAMILY53756UDP-Glycosyltransferase/glycogen phosphorylasecoord: 178..508

Blast
[Close]
BLAST of TCONS_00011973-protein vs. Swiss-Prot (Human)
Match: FUT6 (Alpha-(1,3)-fucosyltransferase 6 OS=Homo sapiens GN=FUT6 PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 2.514e-40
Identity = 102/274 (37.23%), Postives = 144/274 (52.55%), Query Frame = 0 
Query:  224 CHITYDKQLLPLADAVIFHERNM---PSLDMLRTLSRRQNRPISQRWIYFTSETPKNSAISSVPYDGLFNWTMTYRTDSDIYLPYLQYRELDKNEKPPPVINYAKTKNSTIAWLVGNCNF-GFRMKFATLLALETKVFVGGGCRDNYPDRLPCTRWCGLDTLKTYKFYLSFENGVCTDYITEKYWR-YLELGLVPIVLGGADYSNPKLVIPGSFIDASKFKTVKDLAKYVEYLDKNDTAYNEYFTWKQKYKIWHPPTGDWPFESYMMCEICKKL 492
            C+IT D+++ P ADAVI H R +   PS  + R+  RRQ     QRWI+F+ E+P +        DG FN TM+YR+DSDI+ PY            PP+   AKT+   +AW V N      R+++   L    KV V G      P          ++TL  YKFYL+FEN +  DYITEK WR  LE   VP+VLG +  +  + + P +FI    F++ KDLA+Y++ LDK+   Y  YF W++  +   P +  W   +   C+ C KL
Sbjct:   90 CNITADRKVYPQADAVIVHHREVMYNPSAQLPRS-PRRQG----QRWIWFSMESPSHCWQLKA-MDGYFNLTMSYRSDSDIFTPYGWLEPWSGQPAHPPLNLSAKTE--LVAWAVSNWGPNSARVRYYQSLQAHLKVDVYGRSHKPLPQG------TMMETLSRYKFYLAFENSLHPDYITEKLWRNALEAWAVPVVLGPSRSNYERFLPPDAFIHVDDFQSPKDLARYLQELDKDHARYLSYFRWRETLR---PRSFSW---ALAFCKACWKL 343
The following BLAST results are available for this feature:
BLAST of TCONS_00011973-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FUT62.514e-4037.23Alpha-(1,3)-fucosyltransferase 6 OS=Homo sapiens G... [more]
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