TCONS_00011961-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011961-protein
Unique NameTCONS_00011961-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length127

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011961-protein ID=TCONS_00011961-protein|Name=TCONS_00011961-protein|organism=Clytia hemisphaerica|type=polypeptide|length=127bp
MLSRALKEHTSNQTVIKEQQEERKKVALKAVKDFSGRLVDLLNADVEKAY
NNQRALENEAKILQQHVNQLSKQTMQWATMLENFNQSLKELGDVENWART
IETDITTIASALEYAYKGDGPTDESIQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006711XLOC_006711Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011961TCONS_00011961Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009395BLOC1S1
Vocabulary: Cellular Component
TermDefinition
GO:0031083BLOC-1 complex
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0031083 BLOC-1 complex
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 39..73
IPR009395Biogenesis of lysosome-related organelles complex 1 subunit 1PFAMPF06320GCN5L1coord: 6..117
e-value: 2.2E-39
score: 134.0

Blast
[Close]
BLAST of TCONS_00011961-protein vs. Swiss-Prot (Human)
Match: BL1S1 (Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Homo sapiens GN=BLOC1S1 PE=1 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 6.232e-42
Identity = 68/118 (57.63%), Postives = 84/118 (71.19%), Query Frame = 0 
Query:    1 MLSRALKEHTSNQTVIKEQQEERKKVALKAVKDFSGRLVDLLNADVEKAYNNQRALENEAKILQQHVNQLSKQTMQWATMLENFNQSLKELGDVENWARTIETDITTIASALEYAYKG 118
            MLSR LKEH + Q   KE QE+R++ A+ A    +  LVD LN  V +AY NQR L++E K LQ    Q +KQT QW  M+ENFNQ+LKE+GDVENWAR+IE D+ TIA+ALEY YKG
Sbjct:   29 MLSRLLKEHQAKQNERKELQEKRRREAITAATCLTEALVDHLNVGVAQAYMNQRKLDHEVKTLQVQAAQFAKQTGQWIGMVENFNQALKEIGDVENWARSIELDMRTIATALEYVYKG 146
The following BLAST results are available for this feature:
BLAST of TCONS_00011961-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BL1S16.232e-4257.63Biogenesis of lysosome-related organelles complex ... [more]
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