TCONS_00011959-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011959-protein
Unique NameTCONS_00011959-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length367

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011959-protein ID=TCONS_00011959-protein|Name=TCONS_00011959-protein|organism=Clytia hemisphaerica|type=polypeptide|length=367bp
MNDSLLQSESIFVPLDTSMDIDTIASQSFLINSFETDVPHSVISKPKTPQ
KITMTQEQAFKLLHIAASIIQSKFKGYLQRKRYQSLLKENKAATKIQALW
RGYRTRNLDVKIIKIKHDLLAKKFHEYILSQEEQRDMLINVMLELSRNLQ
ELKMTNNPTTSVAEKPSPEPEASQNNNSDSRLTIDQITDIRTDTTVLDDS
LEDVPENEFNDEYENTNCVPLETNSATNSVDKTPLERSTVPCPSNAESSL
VENNITNSPSEKFSLVMNNVTNCSPEEALPEPNSPEKAPLDFNTDSDDEI
DTEDELPQVLRMRNQKPSNDRPPKELRTNDSGEKNVNDDSAVEKDTTTSP
VELNNIVITISSSDDDD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006710XLOC_006710Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011959TCONS_00011959Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000048IQ motif, EF-hand binding siteSMARTSM00015iq_5coord: 88..110
e-value: 0.02
score: 24.1
coord: 62..84
e-value: 0.0038
score: 26.4
IPR000048IQ motif, EF-hand binding sitePFAMPF00612IQcoord: 91..106
e-value: 1.4E-5
score: 24.4
coord: 66..84
e-value: 2.7E-4
score: 20.4
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 63..92
score: 10.091
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 89..118
score: 8.993
NoneNo IPR availableGENE3D4.10.270.10coord: 60..125
e-value: 9.2E-16
score: 56.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 273..367
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 154..253
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 53..107

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00011959-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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