TCONS_00011958-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011958-protein
Unique NameTCONS_00011958-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length345

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011958-protein ID=TCONS_00011958-protein|Name=TCONS_00011958-protein|organism=Clytia hemisphaerica|type=polypeptide|length=345bp
MKEINVDDENDTLVQLMNELIDVCTLGICFDIHRSIRLGCWQLLEDDDDE
SQKEYEIVNQPGVDVFGQVPVKKQQDCICPNCSRTLAANRFAPHLEKCMG
MGRNSSRIASKRLRGQGPVDGEYNDDNDVDYDWFEYEKKTRKRNNKEKLL
NSPKRSKGRKGDGTLGLSSLVTNGNTSRPGTPCSTGSGEISSNTKAGPTL
QALEALSQEEKVALLTQTCGAISEHTGKMCTRTGKCVQHTDEQRKTVREL
LLGDIDEVPWPPAMRGEGINQLSSSLDQDDIHVDVDGYEEIDGGSLLREF
TPLSWEQESNVSTGSDTMSGPPPSLTSSPSITKTKKSKSRKSRNK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006709XLOC_006709Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011958TCONS_00011958Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013246SAGA_su_Sgf11
IPR013243SCA7_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013246SAGA complex, Sgf11 subunitPFAMPF08209Sgf11coord: 74..105
e-value: 5.0E-17
score: 61.0
IPR013246SAGA complex, Sgf11 subunitHAMAPMF_03047Sgf11coord: 8..104
score: 28.522
NoneNo IPR availableGENE3D3.10.390.10coord: 60..151
e-value: 0.0016
score: 18.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 302..345
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 144..192
IPR013243SCA7 domainPROSITEPS51505SCA7coord: 206..273
score: 10.455

Blast
[Close]
BLAST of TCONS_00011958-protein vs. Swiss-Prot (Human)
Match: AT7L3 (Ataxin-7-like protein 3 OS=Homo sapiens GN=ATXN7L3 PE=1 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 2.431e-54
Identity = 119/303 (39.27%), Postives = 173/303 (57.10%), Query Frame = 0 
Query:   15 QLMNELIDVCTLGICFDIHRSIRLGCWQLLEDDDDESQKEYEIVNQPGVDVFGQVPVK-KQQDCICPNCSRTLAANRFAPHLEKCMGMGRNSSRIASKRLRGQGPVDGEYNDD----NDVDYDWFEYEKKTRKRNNKEKLLNSPKRSKGRKGDGTLGLSSLVTNGNTSRPGTPCSTGSGEISSNTKAGPTLQALEALSQEEKVALLTQTCGAISEHTGKMCTRTGKCVQHTDEQRKTVRELLLGDIDEVPWPPAMRGEGINQLSSSLDQDDIHVDVDGYEEIDGGSLLREFTPLSWEQESNVS 312
            ++  +L++   LG CF++HR+++ G +  L+D D +S K++EIV+QPG+D+FGQV  + K ++C+CPNCSR++AA+RFAPHLEKC+GMGRNSSRIA++R+     ++   +D     +  D DW    +K  K+   +K  NSP+RSK  K            NG  S         S     N   G +    E L  EE  +LLT  CG ISEHT KMCTR+ +C QHTDEQR+TVR   LG       P A+    + ++ SSLD        D ++  D  +L+   + L W+  S++S
Sbjct:   22 EIYADLVEDSCLGFCFEVHRAVKCG-YFFLDDTDPDSMKDFEIVDQPGLDIFGQVFNQWKSKECVCPNCSRSIAASRFAPHLEKCLGMGRNSSRIANRRIANSNNMNKSESDQEDNDDINDNDWSYGSEKKAKKRKSDKNPNSPRRSKSLKH----------KNGELS--------NSDPFKYNNSTGIS---YETLGPEELRSLLTTQCGVISEHTKKMCTRSLRCPQHTDEQRRTVRIYFLG-------PSAV----LPEVESSLDN-------DSFDMTDSQALI---SRLQWDGSSDLS 281
The following BLAST results are available for this feature:
BLAST of TCONS_00011958-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AT7L32.431e-5439.27Ataxin-7-like protein 3 OS=Homo sapiens GN=ATXN7L3... [more]
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