TCONS_00011954-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011954-protein
Unique NameTCONS_00011954-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length360

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011954-protein ID=TCONS_00011954-protein|Name=TCONS_00011954-protein|organism=Clytia hemisphaerica|type=polypeptide|length=360bp
MSEMQQIPRLINYPTHEHPLELTEGIKIYPQYNGSWKCDNCELDKTNGEK
PYHCQPCQFDLCINCALPIRHLRHPSHQLYRANMKNVYPQYHGQWRCDGC
DVTRGPELAYHCFHDQFDICDRCVQGQNLPIHQHPLKPVDAAKLYDNAPG
WWACDCCKRHGTEIGSRFSWHCALCEFDCCVDCLAERKTPQHEHPVHLTD
PMKVYGQNGSWSCRECRKQFTTENPEPNRGRPYHCFDCGYDICHECISPA
LHNDGGDIPMDPGLRATYAHNTPSARVTSRPHQPPTEILVDDDDDVNIEN
LDESERCVICCSRRKNATIVHGNTGHVCCCISCANTMQQRGDNCPICRAP
IDLVIKQFNS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006708XLOC_006708Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011954TCONS_00011954Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004146DC1
IPR001841Znf_RING
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 304..353
e-value: 3.3E-11
score: 42.8
NoneNo IPR availableGENE3D3.30.60.20coord: 15..78
e-value: 0.0022
score: 17.5
coord: 189..254
e-value: 0.0048
score: 16.4
NoneNo IPR availableGENE3D1.10.1170.10coord: 263..360
e-value: 3.1E-12
score: 46.5
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 306..354
NoneNo IPR availableSUPERFAMILY57889Cysteine-rich domaincoord: 7..77
NoneNo IPR availableSUPERFAMILY57889Cysteine-rich domaincoord: 164..248
IPR004146DC1PFAMPF03107C1_2coord: 14..66
e-value: 6.5E-10
score: 39.1
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 307..348
score: 9.126

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00011954-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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