TCONS_00011950-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011950-protein
Unique NameTCONS_00011950-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length248

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011950-protein ID=TCONS_00011950-protein|Name=TCONS_00011950-protein|organism=Clytia hemisphaerica|type=polypeptide|length=248bp
MVILGMDVAQSGHVFQPPMGPPPSSLSEKSAILQQQSVIQTNQQLQQQLQ
SMHDNAENNRQKSREILTRRPSYRKILDDLAADSPVKMENYDDNGSSDAS
SPGGPEELTDKQQQAQQQHQHQQQQQQAQQQAQQQYQSIQLNGVIAPPSS
VGGTVVQLNDGQAYTIKGSLPVGLESATLASPQQMAEEATRKRELRLYKN
REAARECRRKKKEYVKCLENRVAVLENQNKALIEELKSLKDLYCSKGD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006705XLOC_006705Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011950TCONS_00011950Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001630Leuzip_CREB
IPR004827bZIP
IPR003102Coactivator_CBP_pKID
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0005515protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0005515 protein binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 42..62
NoneNo IPR availableCOILSCoilCoilcoord: 208..242
NoneNo IPR availableCOILSCoilCoilcoord: 111..131
NoneNo IPR availableGENE3D1.20.5.170coord: 207..246
e-value: 3.6E-17
score: 61.7
NoneNo IPR availableGENE3D1.10.880.10coord: 107..206
e-value: 6.3E-5
score: 22.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..131
NoneNo IPR availableCDDcd14690bZIP_CREB1coord: 192..246
e-value: 3.94159E-29
score: 104.635
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 192..243
IPR001630cAMP response element binding (CREB) proteinPRINTSPR00041LEUZIPPRCREBcoord: 57..79
score: 64.35
coord: 187..203
score: 84.31
coord: 205..225
score: 98.1
coord: 225..242
score: 86.3
IPR004827Basic-leucine zipper domainSMARTSM00338brlzneucoord: 187..245
e-value: 4.7E-5
score: 32.8
IPR004827Basic-leucine zipper domainPFAMPF00170bZIP_1coord: 188..243
e-value: 2.0E-18
score: 66.1
IPR004827Basic-leucine zipper domainPROSITEPS00036BZIP_BASICcoord: 196..210
IPR004827Basic-leucine zipper domainPROSITEPS50217BZIPcoord: 190..241
score: 11.139
IPR003102Coactivator CBP, pKIDPFAMPF02173pKIDcoord: 57..86
e-value: 3.5E-13
score: 48.7
IPR003102Coactivator CBP, pKIDPROSITEPS50953KIDcoord: 40..99
score: 14.029

Blast
[Close]
BLAST of TCONS_00011950-protein vs. Swiss-Prot (Human)
Match: CREB1 (Cyclic AMP-responsive element-binding protein 1 OS=Homo sapiens GN=CREB1 PE=1 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 2.277e-44
Identity = 108/249 (43.37%), Postives = 134/249 (53.82%), Query Frame = 0 
Query:   35 QQSVIQTNQQLQQQLQSMHDNAENNRQKSREILTRRPSYRKILDDLAADSP-----------------------VKMENY-DDNGSSDASSPGGPEEL----TDKQQQAQQQHQHQQQQQQAQQQAQQQYQSIQLNGVIAPPSSVGGTVVQLNDG--QAYTIKGS-----LPVGLESATLASPQQMAEEATRKRELRLYKNREAARECRRKKKEYVKCLENRVAVLENQNKALIEELKSLKDLYCSKGD 248
            Q S I  ++  Q+ + S+ D+     QK REIL+RRPSYRKIL+DL++D+P                       V    Y   +G   A + GG  +L    TD  Q  Q          Q      Q  Q+     ++ P + V   VVQ   G  Q Y I+ +      P  + +++ A P Q AEEA RKRE+RL KNREAARECRRKKKEYVKCLENRVAVLENQNK LIEELK+LKDLYC K D
Sbjct:  101 QISTIAESEDSQESVDSVTDS-----QKRREILSRRPSYRKILNDLSSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSGQYIAITQGGAIQLANNGTDGVQGLQTLTMTNAAATQPGTTILQYAQTTDGQQILVPSNQV---VVQAASGDVQTYQIRTAPTSTIAPGVVMASSPALPTQPAEEAARKREVRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKSD 341
The following BLAST results are available for this feature:
BLAST of TCONS_00011950-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CREB12.277e-4443.37Cyclic AMP-responsive element-binding protein 1 OS... [more]
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